Pairwise Alignments

Query, 519 a.a., transcriptional regulator CadC from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., lysine decarboxylation/transport transcriptional activator CadC from Serratia liquefaciens MT49

 Score =  168 bits (425), Expect = 5e-46
 Identities = 134/517 (25%), Positives = 239/517 (46%), Gaps = 34/517 (6%)

Query: 6   FQINDWVLCIDENKLYRQDREVSAEPRLINLLHFLAEHAGEVFGREELIQHVWDGAIVTD 65
           F++ +W++   +NK+ R  R+ + EPRLI++L + A H   V  R+ELI +VW   IVT+
Sbjct: 6   FRVGEWLVTPADNKISRDGRQQTLEPRLIDMLQYFARHPDVVLSRDELIDNVWKRNIVTN 65

Query: 66  QVVTQSIFELRKLLRDGREENLSYVVTVPKRGYKLVANVQRLDGNPYVSRQEESTASDVC 125
            VVTQSI ELRK L+DG   +  Y++TVPKRGYKL A V   +G+   +      A    
Sbjct: 66  HVVTQSISELRKYLKDGDTNSPEYIITVPKRGYKLAAPVMWCEGDDVATPAVPQVA---V 122

Query: 126 LADDIDDVEDAVPEIVFPAGPLTRAVCQSQQPKKSSKPNVSR------------WRLNLL 173
           +  + +D  D   E             +  +P K+  P+V+             W L  L
Sbjct: 123 IMHEPEDGSDGSEE--------DEVAYEPPKPTKTKTPSVTSTTPFYRQSTFWVW-LAFL 173

Query: 174 NAIWIGLVIVAMGFFTVQQSQVRITQVVDTHLIEFKFQDGFHAQALTHELA--DGIAQKL 231
            A+   +V VA+   + +  +  +  +++   I+ + Q G      T +L+   G+++ +
Sbjct: 174 AALSACVVFVAIATLSQRIPESTMPVLMNPRDIDIRIQGGNSCSNWTPQLSYVVGLSEVV 233

Query: 232 MADLTQVSDYRV-ILGKTAYSSGILPGKSIMVRVNDQDGHE----FLDLELKNNSSDAVL 286
              L   S + V       Y+     GKS+ +   +Q  +     FL + L NN+  +++
Sbjct: 234 TDSLNTYSTFLVHDQTNYNYTGPSSSGKSLTIEFVNQRHYRAQQCFLSVRLVNNADSSIM 293

Query: 287 FSRQYPLDSQHLASVLKSAEWDVMQALKIPNAEQQAQRLLVDFPRQPAALGLYVRANHYL 346
             ++Y +   +   + +     +  ALK P   Q  QRL    P    AL  Y +A+  L
Sbjct: 294 LDKRYFVTDDNQLKIQEDFLSSLSTALKQPWPPQLQQRLTQLLPNSGPALQQYYQAHQLL 353

Query: 347 NVADRPQFQKGIYLLEQVLKLEPDNHYVQAELLIAYHVQQAISPDQALNQDRMLVLSEQL 406
              D         +L  ++K+ P+  Y+ AE  +A  ++ +  P   +   ++  L  ++
Sbjct: 354 IQGDNDSLTHASNMLADMIKITPNFIYLSAEKALADLLRNSYQPFDGV---QLAQLQAEI 410

Query: 407 QQVSYSPQAVVQPRIYEALALQATVENQVETATHYLAQAQGLRESVLSYVLQGKHAELKG 466
            +++  P     P I +   +QA  +   + A   +     L+ S ++YVL GK  E++G
Sbjct: 411 TRLNTLPALKESPIIQQIHTIQALGQGNTDEAHQAINIGIELQMSWMNYVLLGKVYEMQG 470

Query: 467 DLDGASDAYSEAFYMDTSLETYLLCENLVFHSNLKSI 503
           +   A+D+Y  AF +     T     N VFH+++ ++
Sbjct: 471 NNHLAADSYITAFNLRPGENTLHWISNAVFHTSINAV 507