Pairwise Alignments

Query, 519 a.a., transcriptional regulator CadC from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., Transcriptional activator of cad operon from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  162 bits (409), Expect = 4e-44
 Identities = 133/507 (26%), Positives = 236/507 (46%), Gaps = 20/507 (3%)

Query: 7   QINDWVLCIDENKLYRQDREVSAEPRLINLLHFLAEHAGEVFGREELIQHVWDGAIVTDQ 66
           +I +W++    N++ RQ R+++ EPRLI+LL + A H  EV  R+ +I HVW   IVT+ 
Sbjct: 7   RIGEWLVTPSVNQISRQGRQITLEPRLIDLLMYFAHHPDEVLSRDNIIDHVWMRTIVTNH 66

Query: 67  VVTQSIFELRKLLRDGREENLSYVVTVPKRGYKLVANVQRLDGNPYVSRQEESTASDVCL 126
           VVTQSI ELRK LRDG + N  Y+VTVPKRGYKL A V   + N      +E   S    
Sbjct: 67  VVTQSISELRKSLRDGGDSNAEYIVTVPKRGYKLTAPVIWCEEN-----SDEIDNSSTSP 121

Query: 127 ADDIDDVEDAVPEIVFPAGPLTRAVCQSQQPKKSSKPNVS---RWRLNLLNAIWIGLVIV 183
              I        E V  A P+  A  Q+   KK+ KP ++    W + LL+   + +V +
Sbjct: 122 PPPIAATNAEPTEGVTAATPVPPASLQT-PTKKAKKPRIAAFWTWVMFLLSLATL-VVFI 179

Query: 184 AMGFFTVQQSQVRITQVVDTHLIEFKFQDGFHAQALTHELADGIA-QKLMADLTQVSDYR 242
            M       +  +   +++   I+ +F+ G        + +  I    L+ DL       
Sbjct: 180 VMSVVDHNAAVTKTRLLLNPRDIDVRFEGGNSCNNWVSQESYAIGLGGLITDLLNTYSTF 239

Query: 243 VILGKTAY--SSGILPGKSIMVRVNDQDGHE----FLDLELKNNSSDAVLFSRQYPLDSQ 296
           ++  KT Y  +     GK++ ++  +Q  +     F+ + L +N+  + +  ++Y + + 
Sbjct: 240 MVHDKTNYRVNEPSSSGKTLTIQFVNQRHYRAQQCFMSVVLIDNADGSTMLDKRYFVTNT 299

Query: 297 HLASVLKSAEWDVMQALKIPNAEQQAQRLLVDFPRQPAALGLYVRANHYLNVADRPQFQK 356
           +  S+       +   L  P   +  ++L +    Q  AL  +  A   +   D     K
Sbjct: 300 NQLSIQDDLFNSLSFVLTQPWPNRMREQLALFRTPQNTALMRFYEARQLILSGDAQALGK 359

Query: 357 GIYLLEQVLKLEPDNHYVQAELLIAYHVQQAISPDQALNQDRMLVLSEQLQQVSYSPQAV 416
              +L  ++K  PD +Y     ++   ++Q+    Q  +++++  L+E+ +++   P   
Sbjct: 360 ASDILNGIIKETPDFNYAYEYKVLVDVLRQS---QQPFDKEQVAALNEEFKKIDQIPGVE 416

Query: 417 VQPRIYEALALQATVENQVETATHYLAQAQGLRESVLSYVLQGKHAELKGDLDGASDAYS 476
                Y+   +    +  ++ A   + ++  L  S  +YVL GK  E+KG+   A+DAY 
Sbjct: 417 KTSVYYKIKTVDLLGKGDIDAAYEEINKSIELEMSWFNYVLLGKVYEMKGENRLAADAYL 476

Query: 477 EAFYMDTSLETYLLCENLVFHSNLKSI 503
            AF +     T    EN VF ++++ I
Sbjct: 477 TAFNLRPGENTLYWIENGVFQTSVQKI 503