Pairwise Alignments

Query, 519 a.a., transcriptional regulator CadC from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., lysine decarboxylation/transport transcriptional activator CadC from Escherichia coli ECRC62

 Score =  163 bits (412), Expect = 2e-44
 Identities = 134/511 (26%), Positives = 245/511 (47%), Gaps = 36/511 (7%)

Query: 7   QINDWVLCIDENKLYRQDREVSAEPRLINLLHFLAEHAGEVFGREELIQHVWDGAIVTDQ 66
           ++ +W++    N++ R  R+++ EPRLI+LL F A+H+GEV  R+ELI +VW  +IVT+ 
Sbjct: 7   RVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNH 66

Query: 67  VVTQSIFELRKLLRDGREENLSYVVTVPKRGYKLVANVQRLDGNPYVSRQEESTASDVCL 126
           VVTQSI ELRK L+D  E++  Y+ TVPKRGYKL+         P +   EE    +  +
Sbjct: 67  VVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMV--------PVIWYSEEE--GEEIM 116

Query: 127 ADDIDDVEDAVPEIVFPAGPL---TRAVCQSQQPKKSSK-PNVSRWRLNLLNAIWIGLVI 182
                 + +AVP    P+  L     A    Q P KS +      W   LL+   +G+ +
Sbjct: 117 LSSPPPIPEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFWVWFFFLLS---LGICV 173

Query: 183 VAMGFFTVQ----QSQVRI---TQVVDTHLIEFKFQDGFHAQALTHELADGIAQKLMADL 235
             + F T+      S+ RI    + +D +++            L++  A G+   +   L
Sbjct: 174 ALVAFSTLDTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSY--AIGVGNLVATSL 231

Query: 236 TQVSDYRVILGKTAYS--SGILPGKSIMVRVNDQDGHE----FLDLELKNNSSDAVLFSR 289
              S + ++  K  Y+       GK++ +   +Q  +     F+ ++L +N+  + +  +
Sbjct: 232 NTFSTF-MVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDK 290

Query: 290 QYPLDSQHLASVLKSAEWDVMQALKIPNAEQQAQRLLVDFPRQPAALGLYVRANHYLNVA 349
           +Y + + +  ++       + +AL  P  ++  + L    P + A L  + +A+ YL   
Sbjct: 291 RYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQQILPHRGALLTNFYQAHDYLLHG 350

Query: 350 DRPQFQKGIYLLEQVLKLEPDNHYVQAELLIAYHVQQAISPDQALNQDRMLVLSEQLQQV 409
           D     +   LL ++++  P+  Y +AE  +   V+ +  P   L++ ++  L+ ++  +
Sbjct: 351 DDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHP---LDEKQLAALNTEIDNI 407

Query: 410 SYSPQAVVQPRIYEALALQATVENQVETATHYLAQAQGLRESVLSYVLQGKHAELKGDLD 469
              P+      IY+  A+ A V+ + + +   +     L  S L+YVL GK  E+KG   
Sbjct: 408 VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNR 467

Query: 470 GASDAYSEAFYMDTSLETYLLCENLVFHSNL 500
            A+DAY  AF +     T    EN +F +++
Sbjct: 468 EAADAYLTAFNLRPGANTLYWIENGIFQTSV 498