Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Xylose-responsive transcription regulator, ROK family from Variovorax sp. SCN45

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 25/199 (12%)

Query: 33  LIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNY-----SQFVDCVCSLIVDAEQATQPV 87
           L+G++I    + +  +  QG +LY    A  D+      +Q            EQ    +
Sbjct: 84  LMGVEIAVETVRLVCMSLQGEVLYSDTQALADSAPAGACAQVARMASVAQARLEQLGLRL 143

Query: 88  DSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGR------EVKLANDANCFAL 141
            SIG+ +PGAV   TG+++ A         L   L+   G        V+L NDA+   L
Sbjct: 144 SSIGVCVPGAVDDCTGVVRFAPNLGWRNVSLLPALEKAFGAVGLPRVTVQLQNDADAAVL 203

Query: 142 SE-----AIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLE 196
            E     ++   G++ ++     +G G G  +V+N ++  G   + GE GH       LE
Sbjct: 204 GEYEFAASVGQEGEDPLIFVNCDVGVGAG--VVLNDRLFTGAQGMAGEIGHT-----ILE 256

Query: 197 QDGAARYCYCGRQNCIERF 215
            DG    C CGR+ C E F
Sbjct: 257 LDGPE--CSCGRRGCAEAF 273