Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Putative ROK-family transcriptional regulator from Variovorax sp. SCN45

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 69/268 (25%), Positives = 105/268 (39%), Gaps = 33/268 (12%)

Query: 36  LDIGGTKIEICVLDKQGSMLYRQR----IATPDNYSQFVDCVCSLI-VDAEQATQP--VD 88
           +DIGGTK+ + +     + L  +R      T DN +  V  +  +  V AEQ   P  +D
Sbjct: 5   VDIGGTKVAVSLSPSSEAPLVGRRSEPTAKTGDNDAVAVQIIRMIEEVCAEQGVDPASID 64

Query: 89  SIGIGLPGAVSPVTGLIKNANCTFLNG--------------QDLSSDLQYRLGREVKLAN 134
            +G+   G      GL++ A      G                + + L  R G  V++ N
Sbjct: 65  RVGVSSTGPFELHDGLVELATPNICGGIAGPSRGLPNSWMTAIVEAPLVKRFG-SVRVEN 123

Query: 135 DANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYH 194
           DA     +E   GA K       A   TG G  + V+ + L G N   G  GH+      
Sbjct: 124 DAVAALEAERHWGALKGLDNCAYATWSTGVGVGLCVDGRALRGKNGNAGHAGHS-----F 178

Query: 195 LEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEIMKRYKQQEPEAIHCYT 254
           +  D +   C CG    +E  +SGS  +  +        +A+E+       EPEA+    
Sbjct: 179 VVDDTSGALCGCGNYGDVEALVSGSSIEHRFGQ------SAAELFNAASAGEPEALEIAE 232

Query: 255 QLIDHMARSFAGLVNVLDPDIIVLGGGL 282
            L   + R    +V  LD   I LGG +
Sbjct: 233 ALCRVVGRMLYNMVITLDLQRISLGGSV 260