Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., FIG01198523: hypothetical protein from Variovorax sp. SCN45

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 31/280 (11%)

Query: 32  MLIGLDIGGTKIEICVLDKQGSML--YRQRIATPDNYSQFVDCVC----SLIVDAEQATQ 85
           +L+G+DIG T + + VL    ++L  + +     D  +  +  V      L+       +
Sbjct: 78  VLVGIDIGATSLGVAVLRPDLTVLTQHEEPADVRDGPAVLLARVRVLMRELLAQGGHTAR 137

Query: 86  PVDSIGIGLPGAVSPVTGLIKNANCT-FLNGQDLSSDLQYRLGREVKLANDANCFALSEA 144
            V  IGIG+PG V+   G + N       +   +   L+      V + ND N  AL E 
Sbjct: 138 DVLGIGIGVPGPVNFEIGQLVNPPLMPAWDSFSIRDYLREDYAAPVFVDNDVNLMALGEL 197

Query: 145 IDGAGKESMVVFGAI-LGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARY 203
                K S+  F  I +GTG G  IV + +V  G     G+ GH       ++Q+G    
Sbjct: 198 --WRLKRSLTNFLVIKIGTGIGCGIVCHGEVYRGAAGSAGDVGH-----ICVDQEGPR-- 248

Query: 204 CYCGRQNCIERFISGSGF--------QDSYQALTGEC------ITASEIMKRYKQQEPEA 249
           C+CG   C+E   +G           +     L  EC      I A ++ +  +  +  A
Sbjct: 249 CHCGNLGCVEAMAAGPAITRMAVQAAEAGESELLAECLRMHGRIDAIDVGQASRGGDVAA 308

Query: 250 IHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDELY 289
                +    + +  A +VN  +P  + +GGG++ I  L+
Sbjct: 309 NGIIQRAGSLIGQMLASVVNFFNPSHVFIGGGITRIGPLF 348