Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., putative NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score = 73.6 bits (179), Expect = 6e-18
 Identities = 74/303 (24%), Positives = 126/303 (41%), Gaps = 31/303 (10%)

Query: 34  IGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFV--DCVCSLIVDAEQATQPVDSIG 91
           + +DIGGTK+   ++   G +  R+ + TP + +     D + +L+   +   Q V    
Sbjct: 4   LAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRV---- 59

Query: 92  IGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKE 151
                A++  TG+I++ +   LN  +L   L + L + ++   +    A+++A   A  E
Sbjct: 60  -----AIAS-TGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAE 113

Query: 152 SMVVFGAI-------LGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYC 204
              + G I       + TG GG +V   ++L GP  + G  GH          D     C
Sbjct: 114 FQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHT-------LADPHGPVC 166

Query: 205 YCGRQNCIERFISGSGFQDSYQA-LTGECITASEIMKRYKQQEPEAIHCYTQLIDHMARS 263
            CGR  C+E   SG G   + Q  L G    A  I  R  Q + +A     +    +AR 
Sbjct: 167 GCGRTGCVEAIASGRGIAAAAQGELAG--ADAKTIFTRAGQGDEQAQQLIHRSARTLARL 224

Query: 264 FAGLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGIRGA 323
            A +    D   +V+GG +   +     + T  A+     +  V    A +   +G+ GA
Sbjct: 225 IADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQE--PAAFHVDLLAAHYRHDAGLLGA 282

Query: 324 AWL 326
           A L
Sbjct: 283 ALL 285