Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 63/324 (19%), Positives = 128/324 (39%), Gaps = 38/324 (11%)

Query: 25  IEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYR--QRIATPDNY---SQFVDCVCSLIVD 79
           + + E +  + L I   +I + + D    ++    Q +A  D+     + +  +    + 
Sbjct: 79  VVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIR 138

Query: 80  AEQATQPVDSIGIGLPGAVSPVTGLIKNANC-TFLNGQDLSSDLQYRLGREVKLANDANC 138
            ++  + + SI I LPG +    G++        +    L   L+   G  V + +D + 
Sbjct: 139 HQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISA 198

Query: 139 FALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQD 198
           + ++EA+ GA + +  V   ++    G  ++ +  +L   ++   E GH  +  Y     
Sbjct: 199 WTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPY----- 253

Query: 199 GAARYCYCGRQNCIERFISGSGF---------QDSYQALTGECITASEIMKRYKQQEPEA 249
              + CYCG   C+E   S             Q     L G+ +T   + +   + +  A
Sbjct: 254 --GKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLA 311

Query: 250 IHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNI---------DELYRDLPTATARHV 300
               T +  H+ R  A +VN+ +P  I++G  LS           D + +    A ++H+
Sbjct: 312 KDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHI 371

Query: 301 FSDSAQVHFAKAVFGDSSGIRGAA 324
             +S Q       F +   + GAA
Sbjct: 372 SVESTQ-------FSNQGTMAGAA 388