Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., possible NAGC-like transcriptional regulator (VIMSS) from Escherichia coli BW25113

 Score =  288 bits (738), Expect = 9e-83
 Identities = 144/301 (47%), Positives = 197/301 (65%), Gaps = 9/301 (2%)

Query: 32  MLIGLDIGGTKIEICVLDKQGSMLYRQRIATP-DNYSQFVDCVCSLIVDAEQATQPVDSI 90
           M IG+D+GGTK E+  L   G  LYR R+ TP D+Y Q ++ + +L+  AEQAT    ++
Sbjct: 1   MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTV 60

Query: 91  GIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGK 150
           G+G+PG++SP TG++KNAN T+LNGQ    DL  RL REV+LANDANC A+SEA+DGA  
Sbjct: 61  GMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAA 120

Query: 151 ESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARY-----CY 205
            +  VF  I+GTGCG  +  N +  +G N   GEWGHNPLP   +++D   RY     CY
Sbjct: 121 GAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLP--WMDED-ELRYREEVPCY 177

Query: 206 CGRQNCIERFISGSGFQDSYQALTGECITASEIMKRYKQQEPEAIHCYTQLIDHMARSFA 265
           CG+Q CIE FISG+GF   Y+ L+G  +  SEI++  ++ +P A     +    +A+S A
Sbjct: 178 CGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLA 237

Query: 266 GLVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGIRGAAW 325
            +VN+LDPD+IVLGGG+SN+D LY+ +     + VF    +    KA  GDSSG+RGAAW
Sbjct: 238 HVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAW 297

Query: 326 L 326
           L
Sbjct: 298 L 298