Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., DNA-binding transcriptional repressor Mlc from Escherichia coli ECRC62

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 67/325 (20%), Positives = 131/325 (40%), Gaps = 40/325 (12%)

Query: 25  IEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYR--QRIATPDNYSQFVDCVCSLI----V 78
           + + E +  + L I   +I + + D    ++    Q +A  D+ S  +D + S I    +
Sbjct: 79  VVETEAWHYLSLRISRGEIFLALRDLSSKLVVEESQELALKDD-SPLLDRIISHIDQFFI 137

Query: 79  DAEQATQPVDSIGIGLPGAVSPVTGLIKNANC-TFLNGQDLSSDLQYRLGREVKLANDAN 137
             ++  + + SI I LPG +    G++        +    L   L+   G  V + +D +
Sbjct: 138 RHQKKLERLTSIAITLPGIIDTENGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDIS 197

Query: 138 CFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQ 197
            + ++EA+ GA + +  V   ++    G  ++ +  +L   ++   E GH  +  Y    
Sbjct: 198 AWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPY---- 253

Query: 198 DGAARYCYCGRQNCIERFISGSGF---------QDSYQALTGECITASEIMKRYKQQEPE 248
               + CYCG   C+E   S             Q     L G+ +T   + +   + +  
Sbjct: 254 ---GKRCYCGNHGCLETIASVDSILELAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLL 310

Query: 249 AIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNI---------DELYRDLPTATARH 299
           A    T +  H+ R  A +VN+ +P  I++G  LS           D + +    A ++H
Sbjct: 311 AKDIITGVGAHVGRILAIMVNLFNPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQH 370

Query: 300 VFSDSAQVHFAKAVFGDSSGIRGAA 324
           +  +S Q       F +   + GAA
Sbjct: 371 ISVESTQ-------FSNQGTMAGAA 388