Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., ROK family transcriptional regulator from Dickeya dianthicola ME23

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 51/274 (18%), Positives = 108/274 (39%), Gaps = 21/274 (7%)

Query: 29  EFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQ-----FVDCVCSLIVDAEQA 83
           E +  + + I    + + + D  G ++  + +  P  + Q      +  +    +  ++ 
Sbjct: 83  EAWHYLSVRISNQVMTLALRDLSGHLVVEEWVDLPTEHPQSLLERILAEIDQFFIRHQRK 142

Query: 84  TQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSE 143
            + + +I I  PG V   TG+I       +    +   L+ R G  V L +D   + ++E
Sbjct: 143 LERLTAIAITSPGMVDSSTGIIHRMPFYDVEEMAIGPALEKRTGVPVYLQHDICAWTMAE 202

Query: 144 AIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARY 203
           A+ GA +    V   ++    G  ++   ++L   +    E GH  +  Y        + 
Sbjct: 203 ALFGASRGCQNVIQIVIDHNVGAGVITGGRILHAGSRTLVEIGHTQVDPY-------GKR 255

Query: 204 CYCGRQNCIERFISGSGFQDSYQ---------ALTGECITASEIMKRYKQQEPEAIHCYT 254
           CYCG   C+E   S     +  Q          L G  +T   +     + +  A     
Sbjct: 256 CYCGNHGCLETVASIESMLELAQQRLNGSMSSLLHGSPLTVESLCDAALKGDQLAKDIIV 315

Query: 255 QLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDEL 288
            + +++ R  A +VN+ +P+ I++G  L+   ++
Sbjct: 316 DVGNNVGRITAIMVNLFNPEKILIGSPLNQAADI 349