Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., ROK family protein from Dickeya dadantii 3937

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 71/284 (25%), Positives = 111/284 (39%), Gaps = 22/284 (7%)

Query: 5   VSREHTINNGSSMAD-HDEHPIEQKEFYMLIGLDIGGTKIEICVLDKQGSMLYR--QRIA 61
           + ++H I   S   + H + P+       +IG D+GGTK+   +    G +L    Q  A
Sbjct: 47  MEKQHIIQQKSPGVELHPQSPV-------VIGFDLGGTKVNGRLTTLSGEVLAHTSQPTA 99

Query: 62  TPDNYS---QFVDCVCSLIVDAEQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDL 118
             D  +   Q      +L+  A      +  + IG+PG++     +  + N         
Sbjct: 100 KGDEQAALQQMSSLAQALLQQAHITPNRLKHVAIGIPGSIDKQRNVQLSPNLRLPARLPN 159

Query: 119 SSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQVLVGP 178
              L       V   ND N  AL E   G GK S  +     GTG G  I+    ++ G 
Sbjct: 160 LFSLPDGQSCPVVFENDVNLAALGEYHYGHGKGSDSLVFIAFGTGVGMGIITQGSIISGH 219

Query: 179 NAICGEWGHNPLPGYHLEQDGAARYCYCGRQNCIERFISGSGFQDSYQALTGECITASEI 238
           N + GE    PL     +    AR    G     E  +S S  +  Y     E I   +I
Sbjct: 220 NGMAGEIALLPLSAKPYDD---ARISVGG---VFEDRVSSSAIRQRYLGGETEVI---DI 270

Query: 239 MKRYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGL 282
            +R +Q + +A           A   A  V++L+P+ +VLGGG+
Sbjct: 271 FRRAEQGDEQARTVLEHTAQIAALGVASAVSLLNPEWLVLGGGI 314