Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., ROK family transcriptional regulator from Bacteroides stercoris CC31F

 Score = 78.2 bits (191), Expect = 3e-19
 Identities = 76/317 (23%), Positives = 144/317 (45%), Gaps = 36/317 (11%)

Query: 34  IGLDIGGTKIEICVLDKQGSMLYRQRIATP---DNYSQFVDCVCSLIVDAEQATQPVD-- 88
           IG+DI    I I +++ +G M+   R+  P   +N  + +D +C+LI    + T+  D  
Sbjct: 88  IGVDIKKFAINIGLINFKGDMV-EIRMNIPYKFENTQEALDELCALIRSFIKRTEINDKK 146

Query: 89  --SIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAID 146
             +I I + G V+P +G   + +    + + L+  L  ++G  V + ND       E + 
Sbjct: 147 IMNICINISGRVNPESGY--SFSMFNFSERPLADILNEKIGYPVCIDNDTRAMTYGEHMQ 204

Query: 147 GAGKESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAARYCYC 206
           G  K    +    +  G G  I+++ +V  G +   GE+GH  +    +        C+C
Sbjct: 205 GCVKGEKDIIFVNISWGLGIGIIIDGKVYTGKSGFSGEFGHVNVFDNEI-------LCHC 257

Query: 207 GRQNCIERFIS------------GSGFQDSYQALTGE-CITASEIMKRYKQQEPEAIHCY 253
           G++ C+E   S            GSG        T E   T  EI+    +++   I   
Sbjct: 258 GKKGCLETEASGAALYRILLERIGSGESSILSKRTAENPPTLDEIITAVNKEDLLCIEIV 317

Query: 254 TQLIDHMARSFAGLVNVLDPDIIVLGGGLSNI-DELYRDLPTATARH---VFSDSAQVHF 309
            ++   + R  AGL+++ +P+++++GG LS+  D + + + TA  ++   + +  A V  
Sbjct: 318 EEIGQKLGRQIAGLISIFNPELVIIGGTLSSTGDYIVQPIKTAIRKYSLNLVNKDATVTV 377

Query: 310 AKAVFGDSSGIRGAAWL 326
           +K    D +G+ GA  L
Sbjct: 378 SK--LKDKAGVVGACML 392