Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., N-acetylglucosamine-inducible nag divergent operon transcriptional repressor from Escherichia coli BL21

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 61/280 (21%), Positives = 115/280 (41%), Gaps = 28/280 (10%)

Query: 26  EQKEFYMLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQ-----FVDCVCSLIVDA 80
           E + F+  IG+ +G     I + D    +L  +    P+   Q      ++ +   I   
Sbjct: 82  ETRNFHA-IGVRLGRHDATITLFDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSY 140

Query: 81  EQATQPVDSIGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFA 140
           ++  + + +I + LPG V P +G I       +    L   L+ R      + +D    A
Sbjct: 141 QRKLRELIAISVILPGLVDPDSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLA 200

Query: 141 LSEAIDGAGK--ESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQD 198
           L+E   GA +  E  ++     GTG G  I+ N ++ +G N   GE G       H++ +
Sbjct: 201 LAEHYFGASQDCEDSILVRVHRGTGAG--IISNGRIFIGRNGNVGEIG-------HIQVE 251

Query: 199 GAARYCYCGRQNCIERFISGSGFQ--------DSYQALT--GECITASEIMKRYKQQEPE 248
                C+CG   C+E   + +  +          YQ+     +C T   I K   + +  
Sbjct: 252 PLGERCHCGNFGCLETIAANAAIEQRVLNLLKQGYQSRVPLDDC-TIKTICKAANKGDSL 310

Query: 249 AIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGLSNIDEL 288
           A      +  H+ ++ A  +N+ +P  IV+ G ++  D++
Sbjct: 311 ASEVIEYVGRHLGKTIAIAINLFNPQKIVIAGEITEADKV 350