Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ROK family transcriptional regulator from Agrobacterium fabrum C58

 Score = 59.3 bits (142), Expect = 2e-13
 Identities = 56/218 (25%), Positives = 87/218 (39%), Gaps = 15/218 (6%)

Query: 115 GQDLSSDLQYRLGREVKLANDANCFALSEAIDGAGKESMVVFGAILGTGCGGSIVVNRQV 174
           G D    L    G++V + NDA   A+ E + GAG           G G G  I+ +   
Sbjct: 178 GIDARQMLSEACGQQVVVENDATAAAVGERLFGAGLAIPNFCMIYFGVGIGLGIIQDGAP 237

Query: 175 LVGPNAICGEWGHNPLPGYHLEQDGAARYC-YCGRQNCIERFISGSGFQDSYQALTGECI 233
             G     GE GH       +      R C  CG++ C+E + S    ++  + +     
Sbjct: 238 YRGAFGNAGEIGH-------VTVSPKGRLCPSCGQRGCLEAYASAYVLKEKLRHVGVADT 290

Query: 234 TASEIMKRYKQQEPEAIHCYTQLIDHMARSFAGLVNVLDPDIIVLGGGL-----SNIDEL 288
              ++   +K   P  +    +   H+A   A L N+LDP  ++LGG L     S I + 
Sbjct: 291 ELDDLEALFKAGHPVVMEWIDEAAAHLAPMVAMLENILDPQTVILGGALPEAIISEIIQR 350

Query: 289 YRDLPTATARHVFSDSAQVHFAKAVFGDSSGIRGAAWL 326
              LPT+ A     +  +V   K+  G  +   GAA L
Sbjct: 351 MGHLPTSVASRRQRELPRVMHGKS--GQLTAALGAAAL 386