Pairwise Alignments

Query, 326 a.a., transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., transcriptional regulator, ROK family from Agrobacterium fabrum C58

 Score =  129 bits (325), Expect = 7e-35
 Identities = 89/298 (29%), Positives = 144/298 (48%), Gaps = 9/298 (3%)

Query: 32  MLIGLDIGGTKIEICVLDKQGSMLYRQRIATPDNYSQFVDCVCSL--IVDAEQATQPVDS 89
           M++  DIGGT I+  +      +    RI TP   + F D    L  ++DA   T    S
Sbjct: 1   MIVCFDIGGTTIKGAIAHTPDDIRPVPRIPTPK--TSFEDFAAGLKSVIDASGGTPGCVS 58

Query: 90  IGIGLPGAVSPVTGLIKNANCTFLNGQDLSSDLQYRLGREVKLANDANCFALSEAIDGAG 149
           + I   G + P TG    AN   ++G+ L  +L+  L   V ++NDA+CF ++E+  G+G
Sbjct: 59  LSIA--GVIDPDTGKATVANIPSIHGRVLKDELEKALNLPVIVSNDADCFVIAESEIGSG 116

Query: 150 KESMVVFGAILGTGCGGSIVVNRQVLVGPNAICGEWGHNPLPGYHLEQDGAA--RY-CYC 206
           +   VVFG ILGTG GG +V++ +++       GEWGH P+          +  R+ C C
Sbjct: 117 QGHRVVFGVILGTGVGGGLVIDGKLINSHGGFAGEWGHGPVAATSAGNPPVSLPRFECGC 176

Query: 207 GRQNCIERFISGSGFQDSYQALTGECITASEIMKRYKQQEPEAIHCYTQLIDHMARSFAG 266
           G   C++   S  G +  +  L  + +T+ +I+  ++  + +A      LID +A   A 
Sbjct: 177 GLTGCVDAIGSARGMEKLHAHLHRQEMTSEDIIAAWQAGDAKAARTIDVLIDILASPLAM 236

Query: 267 LVNVLDPDIIVLGGGLSNIDELYRDLPTATARHVFSDSAQVHFAKAVFGDSSGIRGAA 324
           ++NV    I+ +GGGLSN  EL   L  A    +     +     A+     G+ G+A
Sbjct: 237 VINVTGATIVPVGGGLSNSRELLAALDEAVRGRILRRFNRPLVVPAICRIEPGLIGSA 294