Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., nucleoside-diphosphate sugar epimerase/dehydratase from Variovorax sp. OAS795

 Score =  460 bits (1183), Expect = e-133
 Identities = 270/630 (42%), Positives = 376/630 (59%), Gaps = 18/630 (2%)

Query: 8   LLSAQRHHKRMITLLYDVFALMFSLYAAIALRLDTLAFTFSFPEFLSMMTTVGVTLYCFV 67
           +L+  R  K+ + +  DV   + S++ A  LRLD+        E+L+   +  + +  F+
Sbjct: 5   ILNWSRAKKQSLVIGLDVGLALASMWLAFTLRLDSFHRPVG-AEWLAYAISPILVIPVFI 63

Query: 68  RLGMYRAVLRYMMLPAIGYIFLSVIISAVTLA--LSGFFFQAFIPRSVPFIYAGLATLTL 125
           + G+YRA+ RY  +  I     +V I    L+  +   +    +PRS+  +   +  L +
Sbjct: 64  KFGLYRAIFRYTGITTILDTGKAVAIYGAVLSPFIWALYHWEGVPRSLIILQPVIFLLLV 123

Query: 126 GGPRIFIRTIYYHYYKRQKPNVFIYGAGSTGRDLAYALIQGDEYHPVIFLDDDPAKTGQI 185
              R            R    + IYGAG+ G   A AL   + Y  + F+DDDP+K G+ 
Sbjct: 124 SSSRTLGWRWLAGPGNRAVRRLLIYGAGTAGAQTAAALAGTEHYVLLGFIDDDPSKNGRS 183

Query: 186 IFGLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERLSHWPIEIQSVPSVEDIA 245
           I G  V  S+  +   +L+    +L+A+ +  +  R ++++RL   P+ I+S+PS+ D+A
Sbjct: 184 INGAPVFSSAGIQETISLFSVTDVLLALPSASRQRRNQIIKRLQPLPVRIRSLPSLADLA 243

Query: 246 AGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGSELCRQILAQK 305
           +GR    D QDLDI DLLGR PV  D ALL +++ E+ VMVTGAGGSIGSELCRQI+ QK
Sbjct: 244 SGRITVRDFQDLDIEDLLGREPVVSDPALLARSLAEQVVMVTGAGGSIGSELCRQIILQK 303

Query: 306 PKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKLMQAHQVETVY 365
           P+ ++L + +E+ LY I QEL  +     LN +++  L +V    R+  L  AH+   +Y
Sbjct: 304 PRQMILLDHSEFLLYGIHQELLQLLAACNLNVELIPRLANVCNYERIYALCCAHRPVAIY 363

Query: 366 HAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAVRPTNIMGASK 425
           HAAAYKHVPLVE N  EG+ NNV GT   A AAI++ V  F LISTDKAVRP NIMG SK
Sbjct: 364 HAAAYKHVPLVEQNAEEGVINNVLGTWTMARAAIKSKVNRFVLISTDKAVRPANIMGGSK 423

Query: 426 RMAELVLQALADKNS--------------TTIFTMVRFGNVLGSSGSVVPLFKKQIRAGG 471
           R+AE++LQ+LA  +                T F+MVRFGNVLGSSGSVVPLF+ QI  GG
Sbjct: 424 RIAEMILQSLAANSDYQMVADDQVEHDFHRTCFSMVRFGNVLGSSGSVVPLFRSQIAEGG 483

Query: 472 PVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLMGMK 531
           P+TVTHP++ R+FM IPEAAQLV+ AGAM+  G +FVLDMG+PVKI++LAKRMI L G  
Sbjct: 484 PLTVTHPEVTRFFMTIPEAAQLVLHAGAMAQEGDLFVLDMGKPVKIIELAKRMIALSG-H 542

Query: 532 EFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGTSHQKIMTACEEKLSWDAMEDLL 591
              D  +  GDI I  TGLR GEKLYEELLIGEN   T+H +I+ A E+ + W     LL
Sbjct: 543 TVRDQENPNGDIPILITGLRAGEKLYEELLIGENPLPTAHPRIIKAREDFMPWPEFSILL 602

Query: 592 TELDVCCHNFDVECIKRILLDAPTGYSPQK 621
             L     + D+  ++  +      +SPQ+
Sbjct: 603 EALLKAARSGDLSTMQHTMRLLIPAFSPQE 632