Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Polysaccharide biosynthesis protein from Pseudomonas putida KT2440

 Score =  513 bits (1322), Expect = e-150
 Identities = 292/646 (45%), Positives = 410/646 (63%), Gaps = 33/646 (5%)

Query: 6   QLLLSAQRHHKRMITLLYDVFALMFSLYAAIALRL--DTLAFTFSFPEFLSMMTTVGVTL 63
           + L++  R  KR++ +  DV  +  +L+ +  +RL  D +        +L M+  + V +
Sbjct: 30  EYLVNLSRRKKRLVQVCADVVLIWLALWLSFIVRLGIDEMYNPVIKHAWLFMVAPL-VAI 88

Query: 64  YCFVRLGMYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFF---QAFIPRSVPFIYAGL 120
             F+R GMYRAV+RY    A+  I  +V +S++ LA+  +++   Q  +PRS+ F Y  L
Sbjct: 89  PLFIRFGMYRAVMRYFGNDALVTIIKAVTLSSLILAVVVYWYSNHQVIVPRSIIFNYWWL 148

Query: 121 ATLTLGGPRIFIRTIYYHYY---KRQKP---------NVFIYGAGSTGRDLAYALIQGDE 168
           + + +GG R+ +R  +   +     Q P          V IYGAG+ G  L  AL  G  
Sbjct: 149 SMVIIGGLRLIMRQYFLGDWFTGAHQIPFANRDDGLVKVAIYGAGTAGNQLLAALRMGRA 208

Query: 169 YHPVIFLDDDPAKTGQIIFGLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERL 228
             PV F+DDD     ++I GL+V+     + +       ++L+A+ ++ +  R ++L  L
Sbjct: 209 MRPVAFIDDDSDLANRVISGLQVYKPKHLQQMIKETGAQEILLALPSVSRARRKEILALL 268

Query: 229 SHWPIEIQSVPSVEDIAAGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTG 288
             +P+ ++SVP+  D+A+GR K  D+QD+DIADLLGR PV     LL++ I +++V+VTG
Sbjct: 269 EPYPLHVRSVPAFADLASGRVKVDDIQDVDIADLLGRDPVPAKEGLLERCIHKQTVLVTG 328

Query: 289 AGGSIGSELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQR 348
           AGGSIGSELCRQI+   P TL+LF+ +EYNLY I  EL+       L  +++  LGSV+ 
Sbjct: 329 AGGSIGSELCRQIIGLGPTTLLLFDHSEYNLYAILSELEQRVARESLPVRLLPILGSVRN 388

Query: 349 ENRVKKLMQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTL 408
           +  +  +M   +V TVYHAAAYKHVP+VE N+ EGI NNVFGTL  A AA+++GV NF L
Sbjct: 389 QQHLAHVMSTWRVATVYHAAAYKHVPMVEHNMAEGILNNVFGTLCTAQAALQSGVANFVL 448

Query: 409 ISTDKAVRPTNIMGASKRMAELVLQALA--------------DKNSTTIFTMVRFGNVLG 454
           ISTDKAVRPTN+MG +KR++EL+LQAL+               + + T FTMVRFGNVLG
Sbjct: 449 ISTDKAVRPTNVMGGTKRLSELILQALSREAAPVMYGDSSKIARVNKTRFTMVRFGNVLG 508

Query: 455 SSGSVVPLFKKQIRAGGPVTVTHPDIIRYFMLIPEAAQLVIQAGAMSHNGQVFVLDMGEP 514
           SSGSV+PLF KQI+AGGP+TVTHP I RYFM IPEAAQLV+QAGAM   G VFVLDMGEP
Sbjct: 509 SSGSVIPLFHKQIKAGGPITVTHPKITRYFMTIPEAAQLVVQAGAMGQGGDVFVLDMGEP 568

Query: 515 VKIVDLAKRMIHLMGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIGENVEGTSHQKI 574
           VKIV+LA++MIHL G+     G +  GDI I+FTGLRPGEKL+EELLIG++V  T H  I
Sbjct: 569 VKIVELAEKMIHLSGLSVRSSG-NPNGDIAIEFTGLRPGEKLFEELLIGDDVSPTVHPMI 627

Query: 575 MTACEEKLSWDAMEDLLTELDVCCHNFDVECIKRILLDAPTGYSPQ 620
           M A E+ ++WD + + +  L       D   I+++L +   GY P+
Sbjct: 628 MVANEDYVTWDVLRERIAVLLNAVAVDDFGRIRQLLRELVNGYVPE 673