Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., polysaccharide biosynthesis protein from Magnetospirillum magneticum AMB-1

 Score =  320 bits (820), Expect = 1e-91
 Identities = 226/576 (39%), Positives = 306/576 (53%), Gaps = 47/576 (8%)

Query: 19  ITLLYDVFALMFSLYAAIALRL--DTLAFTFSFPEFLSMMTTVGVTLYCFVRLGMYRAVL 76
           +   +DV     S   A+ LRL  DT  +       L+      V    F+   +YR V 
Sbjct: 11  LAFAHDVSMAALSFVMALYLRLGDDTWIWWDRLDLGLATALFTLVAASVFLSQRLYRGVW 70

Query: 77  RYMMLPAIGYIFLSVIISAVTLALSGFFFQAFI-------PRSVPFIYAGLATLTLGGPR 129
           RY  +       L  +  A TL +  F    F+       PRSV  I   +    LGGPR
Sbjct: 71  RYASVND-----LVALTRAATLTILVFLALLFLTTRLQALPRSVLLINWFVLLALLGGPR 125

Query: 130 IFIRTIYYHYYKRQKPN-------VFIYGAGSTGRDLAYALIQGD-EYHPVIFLDDDPAK 181
              RT   H+  R++         V + GAG        A    D EY  V  L    A+
Sbjct: 126 FIYRTFKDHHRNRRRAQGDHVRVPVLLVGAGDEAELFIRAAHSPDAEYRAVGLLSSRGAR 185

Query: 182 TGQIIFGLRVHHSSDF--ESLRNL----YEPVKMLIAINNIGKNTRIKLLERLSHWPIEI 235
            G+ I G+ V  S+D   E +  L      P +++I  + +  +   +LL+      + +
Sbjct: 186 VGRHIHGIDVLGSTDEMGEVVAALKAKGQAPQRLVITDHRLDGSEVRQLLDDADRLGMTL 245

Query: 236 QSVPSVEDIAAGRAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGS 295
             +P + D+  G  +   ++ + + DLLGR     D   ++  I  + V+VTGAGGSIGS
Sbjct: 246 ARIPRMMDLKDGVEERVTMRPIAVEDLLGRPQAVLDRVSMESMIKGRRVLVTGAGGSIGS 305

Query: 296 ELCRQILAQKPKTLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKL 355
           EL RQI    P +LVLFE  E+NLY IDQE+   +  ++L    V  LG V+   RV + 
Sbjct: 306 ELVRQISDFGPASLVLFEACEFNLYAIDQEISLRQPGMEL----VPLLGDVRDPVRVGEA 361

Query: 356 MQAHQVETVYHAAAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAV 415
           M  ++ + V+HAAA KHVP+VE N  EGI  N  GT   A+A    GV     ISTDKAV
Sbjct: 362 MARYRPDLVFHAAALKHVPMVEYNPDEGILTNCVGTRLVADACRANGVSLMVQISTDKAV 421

Query: 416 RPTNIMGASKRMAELVLQAL---ADKNSTTIFTMVRFGNVLGSSGSVVPLFKKQIRAGGP 472
            PTN+MGASKR+AE+  QAL         T F  VRFGNVLGS+GSVVPLF+KQ+  GGP
Sbjct: 422 NPTNVMGASKRVAEMYAQALDLAESDGGGTRFVTVRFGNVLGSTGSVVPLFQKQLAEGGP 481

Query: 473 VTVTHPDIIRYFMLIPEAAQLVIQAGAM-----SHNGQVFVLDMGEPVKIVDLAKRMIHL 527
           +TVTHPD+ RYFM + EA +LV+QA A      ++ G++FVLDMGEPVKIV LA++MI L
Sbjct: 482 LTVTHPDMTRYFMTVREAVELVLQASAFGIGHPAYRGKIFVLDMGEPVKIVHLARQMIRL 541

Query: 528 MGMKEFCDGRSDEGDIEIKFTGLRPGEKLYEELLIG 563
            G++        + D++I FTGLRPGEKL+EEL  G
Sbjct: 542 AGLR-------PDVDVKITFTGLRPGEKLFEELFHG 570