Pairwise Alignments

Query, 621 a.a., polysaccharide biosynthesis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 628 a.a., Predicted nucleoside-diphosphate sugar epimerases from Enterobacter asburiae PDN3

 Score =  608 bits (1567), Expect = e-178
 Identities = 321/612 (52%), Positives = 428/612 (69%), Gaps = 2/612 (0%)

Query: 8   LLSAQRHHKRMITLLYDVFALMFSLYAAIALRLDTLAFTFSFPEFLSMMTTVGVTLYCFV 67
           L+S  R  KR+ITL  DV  LM + + A  +R+D++    S   +L + + + +TL  FV
Sbjct: 5   LISLPRPIKRIITLSIDVVLLMCAFWFAFWVRIDSMTPLSSVSHWLLLTSIIVITLAIFV 64

Query: 68  RLGMYRAVLRYMMLPAIGYIFLSVIISAVTLALSGFFFQAFIPRSVPFIYAGLATLTLGG 127
           +LG+YRAV+RY+    +  + + ++IS++ L ++ F+   ++PR++PFIY     L + G
Sbjct: 65  KLGLYRAVIRYITAKILLVVAIGMLISSLLLIIAAFYTNLYLPRTIPFIYFSFGVLFVAG 124

Query: 128 PRIFIRTIYYHYYKRQKPNVFIYGAGSTGRDLAYALIQGDEYHPVIFLDDDPAKTGQIIF 187
            R+ +R +     K     V IYGAG++GR L  AL Q DEY+PV F+DD+ +  GQ+I 
Sbjct: 125 SRLAMRMLVNRGLKLGT-RVIIYGAGASGRQLLPALSQMDEYYPVAFVDDNRSLQGQVIH 183

Query: 188 GLRVHHSSDFESLRNLYEPVKMLIAINNIGKNTRIKLLERLSHWPIEIQSVPSVEDIAAG 247
           G+ V        L   YE  K+L+A+ +  +  + +++  L   P E+ S+P + D+  G
Sbjct: 184 GVSVFSPEKLAWLIEKYEAKKILLAMPSASRARKNEVISTLEGLPCEVLSIPGMVDLVEG 243

Query: 248 RAKATDVQDLDIADLLGRAPVEPDLALLQKNITEKSVMVTGAGGSIGSELCRQILAQKPK 307
           +A+   ++ + I DLLGR PV P   L+ KNI  K+VMVTGAGGSIGSELCRQI+  KP 
Sbjct: 244 KARIDALRKVVITDLLGRDPVTPIPELISKNIQGKTVMVTGAGGSIGSELCRQIIRNKPT 303

Query: 308 TLVLFELNEYNLYTIDQELQAIKQNLKLNTKIVAALGSVQRENRVKKLMQAHQVETVYHA 367
            L+LFEL+E++LY+ID EL+ +  +  LN KI   LG+VQ    +++L++A  VET+YHA
Sbjct: 304 QLILFELSEFSLYSIDSELRNLILSQSLNVKIYPILGNVQDMAHLERLIKAFSVETIYHA 363

Query: 368 AAYKHVPLVEDNVIEGIRNNVFGTLACANAAIEAGVKNFTLISTDKAVRPTNIMGASKRM 427
           AAYKHVPLVE NVI+G+RNN+FGTL CA AA   GV++F LISTDKAVRPTN MGA+KRM
Sbjct: 364 AAYKHVPLVEFNVIDGVRNNIFGTLCCAQAAENCGVESFVLISTDKAVRPTNTMGATKRM 423

Query: 428 AELVLQALADKNSTTIFTMVRFGNVLGSSGSVVPLFKKQIRAGGPVTVTHPDIIRYFMLI 487
           AEL+LQALA ++S T F+MVRFGNVLGSSGSVVPLF+KQI AGGPVT+THPDI RYFM I
Sbjct: 424 AELILQALASESSKTCFSMVRFGNVLGSSGSVVPLFEKQIAAGGPVTLTHPDITRYFMTI 483

Query: 488 PEAAQLVIQAGAMSHNGQVFVLDMGEPVKIVDLAKRMIHLMGMKEFCDGRSDEGDIEIKF 547
           PEAAQLVIQAGAM   G VFVLDMG+PVKI+DLA RMI L G+    D ++  GDI IK 
Sbjct: 484 PEAAQLVIQAGAMGSGGDVFVLDMGDPVKIIDLAHRMIALQGL-SVRDDKNPYGDIAIKT 542

Query: 548 TGLRPGEKLYEELLIGENVEGTSHQKIMTACEEKLSWDAMEDLLTELDVCCHNFDVECIK 607
           TGLRPGEKLYEELLIG+NV  T H +I TA E  L W+ M+D++ ELD  C NFD E ++
Sbjct: 543 TGLRPGEKLYEELLIGDNVSITQHPRIKTANEVMLPWNEMKDIIAELDSSCRNFDYERVR 602

Query: 608 RILLDAPTGYSP 619
            ILL+APT ++P
Sbjct: 603 EILLNAPTAFNP 614