Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., AMP-binding protein from Rhodanobacter sp000427505 FW510-R12

 Score =  122 bits (305), Expect = 4e-32
 Identities = 102/354 (28%), Positives = 166/354 (46%), Gaps = 32/354 (9%)

Query: 131 DIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSL 190
           +I FTSGTTG PKG  L+H ++V     I   ++ T  D   + +P  H F M     + 
Sbjct: 206 NIQFTSGTTGAPKGATLTHHNIVNNGWFIGEAMRLTEHDRLCIPVPFYHCFGMVLGNLAC 265

Query: 191 FAGGA--IVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFI 248
              GA  ++ G  F  L +  + +   K TGL  VP      T+   +L     E   F 
Sbjct: 266 VTHGACMVIPGEGFDAL-ATLETVAAEKCTGLHGVP------TMFIAEL-----EHPRFA 313

Query: 249 EF----------GSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHNDD----I 294
           EF            +  P E  ++V +      + + YG+TE S  +F    +D     +
Sbjct: 314 EFDLSTLRTGIMAGSPCPIEVMRRVVDEMHLGEITIAYGMTETSPVSFQTVPDDPLERRV 373

Query: 295 NAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVEG-YFKT 353
           ++VG  +   + K++D +G  V  G  GE+  +   ++ GY+E+++ T +   E  +  T
Sbjct: 374 DSVGRVHPQLEVKLVDERGRIVPRGTLGELCTRGYSVMLGYWEDTERTREVIDEARWMHT 433

Query: 354 GDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEV 412
           GDL  +  D Y  + GRLK++I  GG+ +SP ++E+ L     V +     + DA  GE 
Sbjct: 434 GDLATLDDDGYCRIVGRLKDMIIRGGENISPREIEEFLYTYPKVLDVQVFGVPDAKFGEQ 493

Query: 413 VQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRY 466
           V A+I ++ G   E  ++ I++     L  +  P     V A P TV+GKVQ+Y
Sbjct: 494 VCAWIRLREG--SEASVAEIQDYCCHHLAYYKVPHYVRFVDAFPMTVTGKVQKY 545



 Score = 41.2 bits (95), Expect = 9e-08
 Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 2   SVVERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNS 61
           S+++RI      RP  +   +  R +SY    +++++ AA L++LG+   D V + S N 
Sbjct: 23  SLIDRIAAAHPGRPALVVRAQGVR-LSYREFHAEVERVAAGLLALGLVRGDRVGIWSPNR 81

Query: 62  YSFILLYFSIHYVGAKFVNVAPDSDVSYVSFIEDKV 97
             ++LL F+    G   VN+ P   +  + +  +KV
Sbjct: 82  AEWVLLQFAAPKAGLVLVNINPAYRLHELEYSLNKV 117