Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 2e-34
 Identities = 123/464 (26%), Positives = 204/464 (43%), Gaps = 46/464 (9%)

Query: 38  KTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAKFVNVAPDSDVSYVSFIEDKV 97
           + A  LV+ GV   D V V+   S+  + LY +    GA ++ +     ++ V +     
Sbjct: 41  RLANLLVARGVKPGDRVAVQVEKSWPALALYLATIRAGAVYLPLNTAYTLNEVEYFLSDA 100

Query: 98  NPKLFI---EKSQDF--------IRNIDSY-------------TFDNIFPPQARGIAD-- 131
            P +F+   E  QD         +  +++               F + F   ARG  D  
Sbjct: 101 EPAVFVCRPEIEQDARALAARLGVGAVETLGTDGKGSLTDAAAAFPDTFEDVARGAEDLG 160

Query: 132 -IMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSL 190
            I++TSGTTG  KG +L+H +L+   + +  + + T +DV L  +P+ H+  +      +
Sbjct: 161 GILYTSGTTGRAKGAMLTHANLLSNAQTLKDYWRFTADDVLLHALPIFHTHGLFVASNIV 220

Query: 191 FAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEF 250
              GA +   S    K     +   KVT L  VP+ ++ + L    L R+ ++ +     
Sbjct: 221 LLAGASMEFRSKFDPKEAVALMSAGKVTTLMGVPTFYTRL-LDQPGLTREATKGMRLFIS 279

Query: 251 GSA------HFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDFHNDDI-NAVGHRYRG 303
           GSA      H  FE++   A       ++  YG+TE    T   +    I   VG+   G
Sbjct: 280 GSAPLLAETHRAFEERTGHA-------ILERYGMTETCMNTSNPYDGARIAGTVGYPLPG 332

Query: 304 ADFKIID-NKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKTGDLGRV-VG 361
              ++ D   GA +  GE G I  + P +  GY+   + T+  F +G+F TGDLG++   
Sbjct: 333 ISVRVTDPETGAVLPTGEIGMIEVQGPNVFKGYWRMPEKTAAEFRDGFFITGDLGKIDEN 392

Query: 362 DYLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKS 421
            Y+ + GR K+++  GG  V P +VE  +    GV E A   +   + GE V A IV + 
Sbjct: 393 GYVHIVGRGKDLVITGGFNVYPKEVEGEIDAIPGVVESAVIGVPHPDFGEGVTAVIVAQK 452

Query: 422 GWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQR 465
             D       +   +  +L    +PK+   VS LP+   GKVQ+
Sbjct: 453 --DATLTEEAVHRALENRLAKFKQPKRVFFVSELPRNTMGKVQK 494