Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  119 bits (299), Expect = 2e-31
 Identities = 99/347 (28%), Positives = 170/347 (48%), Gaps = 14/347 (4%)

Query: 126 ARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSH-SFAMA 184
           A  +A + +TSGTTG PKG +  H SL+           +T+E V L ++P+ H +  ++
Sbjct: 211 ANDMALLPYTSGTTGLPKGCVHHHSSLMHNAMAGQLWGGSTSEAVVLAVVPMFHITGVVS 270

Query: 185 RMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS-E 243
            M T++ A   +++   + +     + I  +KVT    +P+    I LM       Y   
Sbjct: 271 MMHTAVLAAATLIIMPRWDR-DVAGRLISRWKVTAWTNIPTM--VIDLMASPNFASYDLS 327

Query: 244 QLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFID-FHNDDINAVGHRYR 302
            +N+I  G A  P    +++ E +        YGLTE +  +  +   +     +G  + 
Sbjct: 328 SMNYIGGGGAAMPQAVAQRLLEQY-GLKYQEGYGLTETAAPSHTNPSDHPKQQCLGIPFM 386

Query: 303 GADFKIID-NKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVE----GYFKTGDLG 357
             D +++D +  AE+  GE GEI+   P +  GY++    T+  FVE     +F++GD+G
Sbjct: 387 STDARVVDPDTLAEMPIGESGEIIIHGPEVFQGYWKRPDATAAAFVEFEGKRFFRSGDMG 446

Query: 358 RVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAY 416
           R+  + Y F+T RLK +IN  G KV P +VE ++     +QE    +  D   GE V+A 
Sbjct: 447 RMDEEGYFFITDRLKRMINASGFKVWPAEVELLMFRHPAIQEACVISTKDDYRGESVKAV 506

Query: 417 IVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKV 463
           +V+++    +     I +     + ++  P+K   V ALPK+ SGKV
Sbjct: 507 VVLRATHK-DTTEQEIIDWCRENMAVYKIPRKVQFVDALPKSGSGKV 552



 Score = 34.7 bits (78), Expect = 9e-06
 Identities = 21/69 (30%), Positives = 33/69 (47%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYV 74
           PD  A+    R +SY + A   ++ A  L +LGV   D V++   N    ++ +F+I   
Sbjct: 37  PDKPALVFFGRVLSYRDFAEQAERLAGALHALGVKRGDRVILDMQNCPQLVIAHFAILRA 96

Query: 75  GAKFVNVAP 83
            A  V V P
Sbjct: 97  NAVVVPVNP 105