Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 2e-28
 Identities = 118/499 (23%), Positives = 213/499 (42%), Gaps = 38/499 (7%)

Query: 2   SVVERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNS 61
           +V E I  H+       A+  + +++ Y  L + + + AA L   G+   D + + +  S
Sbjct: 13  TVAELIHAHALRDAAHTALLLDGQSLDYAALDAQMDRVAAALQRDGLKPGDVIAISAATS 72

Query: 62  YSFILLYFSIHYVGAKFVNVAPDSDVSYVSFIEDKVNPKLF-----IEKSQDFIRNIDSY 116
             + +++      G     +APDS    ++ +      +LF     + ++      +   
Sbjct: 73  LGYAVVFLGAVRAGVAVAPLAPDSTPEGLAAMVADSGVQLFFVDEAVGQATAGTPGVPRI 132

Query: 117 TFDN--IFPPQARGIA-----------------DIMFTSGTTGEPKGVLLSHKSLVLATE 157
             D+  +  P +  +A                 +I+++SGTTG PKG+++ H +   A  
Sbjct: 133 ALDDSGVGAPLSGWLAPAGAQPEPVRLQPDAPFNIIYSSGTTGTPKGIMMPH-AFRWAQV 191

Query: 158 HIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKV 217
            + + +    + V L+ +PL  +  ++    +L  G  +V+   F       +  + ++ 
Sbjct: 192 KLFTSLGYGPDAVTLVSIPLYSNMTLSSFFPALSLGAKVVLMRKF-DAGGYLELAQAHRA 250

Query: 218 TGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYG 277
           T   +VP  +  I +   D  R           GSA FP   K  V   +P   +  +YG
Sbjct: 251 THSMMVPVQFQRI-MAWPDFDRYDLSSFRMKSCGSAPFPVALKADVLARWPG-GLTEYYG 308

Query: 278 LTEVSRATFIDFHN--DDINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGY 335
           +TE      +  H   D ++ VG    G D ++ID++G E+  G+ GEIV ++  M+ GY
Sbjct: 309 MTEGGGVCALPAHERPDKLHTVGKPAPGHDMRVIDDEGRELPRGDIGEIVGRSGTMMVGY 368

Query: 336 FENSQLTSDC---FVEG--YFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKV 389
               Q T++      EG  + ++GD GR   D YL L  R K++I  GG  V P  +E V
Sbjct: 369 HNLPQKTAEAEWFDAEGRRFIRSGDTGRFDEDGYLVLLDRKKDMIISGGFNVYPVDLEAV 428

Query: 390 LSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKY 449
           L     V E A   +     GE   A +V++           ++E  N +L    R    
Sbjct: 429 LRSHPDVDEAAVFGVPSQRWGESPMACVVLREA--ATVAPDALREWANERLGKAQRLVDL 486

Query: 450 SIVSALPKTVSGKVQRYKL 468
            +V +LP++  GKV + +L
Sbjct: 487 RVVQSLPRSDIGKVLKRQL 505