Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  121 bits (303), Expect = 6e-32
 Identities = 123/494 (24%), Positives = 215/494 (43%), Gaps = 54/494 (10%)

Query: 18  IAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGAK 77
           IA    DR  +++ +   + + AA L SLGV     V + + NS  ++ L+FS+ + G  
Sbjct: 18  IATISGDRQRTWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVPWAGGA 77

Query: 78  F------------VNVAPDSDVSYVSFIEDKVNPKL-FIEKSQDFIRNIDSYTFDNIFP- 123
                        V    DS+   V F++D    ++ F+   +  IR++  Y  D   P 
Sbjct: 78  LAPLNIRWSAVENVYALTDSNAE-VLFVDDSFLDQMDFLRAERPSIRHV-IYMGDGPTPA 135

Query: 124 ---------------PQARGIAD----IMFTSGTTGEPKGVLLSHKSLVLATEHIISHVK 164
                          P A    D    I +T GTT  PKGV +SH+ + LAT   ++ + 
Sbjct: 136 GMLAYEELVAQHAPMPDADRKEDDLYVIFYTGGTTAHPKGVAMSHRGVYLATCCYLALLP 195

Query: 165 NTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVP 224
           +  +   L +    H    + +     A G   +   F+ L  V KAI  ++VT   LVP
Sbjct: 196 SVEDLTFLYVAGYFHFAGASALWYITLAAGTHAILPKFEALP-VMKAIGQHRVTNAVLVP 254

Query: 225 SAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSR- 283
           +  + + L   D  +     L    +G +  P     +  +  P+      YG+TE    
Sbjct: 255 TMVNML-LSHPDFKQYDLTSLKTCIYGGSPMPEGLMLRAMKMVPSWGFYQIYGMTETGGF 313

Query: 284 ATFIDFHNDDIN--------AVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGY 335
           AT + + +  ++        + G    G + +++  +G +   GE GEI+ ++ +++ GY
Sbjct: 314 ATMLRWRDHIVSGENASRLRSAGQAGFGNEVRVVRIEGDDADVGEIGEIIVRSDFLMMGY 373

Query: 336 FENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEAL 394
             N + T+ C  +G+  TGD G +  D +L++  R+K++I  GG+ V   + E+ L    
Sbjct: 374 LNNPEATAACLRDGWMHTGDAGYLDADGFLYVADRVKDMIVSGGENVYSIEPERALFLHP 433

Query: 395 GVQECACAALSDANMGEVVQAYIVVKSGWD--CENVISNIKETINGQLPMHMRPKKYSI- 451
            V+E A   +     GE V A +V+K G     E +I++ +  I G    +  P+     
Sbjct: 434 AVREAAVIGIPSEQWGESVHAVVVLKDGASATAEELIAHCRTLIGG----YKCPRSIEFR 489

Query: 452 VSALPKTVSGKVQR 465
              LP T  GKV++
Sbjct: 490 ADPLPVTPVGKVRK 503