Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  120 bits (302), Expect = 9e-32
 Identities = 118/423 (27%), Positives = 181/423 (42%), Gaps = 12/423 (2%)

Query: 55  LVRSNNSYSFILLYFSIHYVGAKFVNVAPDSDVSYVSFIEDKVNPKLFIEKSQDFIRNID 114
           +VR     S +   F++HY  A  ++  P  D+     +E     +   E  +DF+  + 
Sbjct: 120 VVRKVQPESALEHVFAVHY--ADLLSAEPSLDLPAELAVEHNA-ARTVPEGCEDFLAVMK 176

Query: 115 SYTFDNIFPPQARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLL 174
           S         +   +A + +TSGTTG PKG +LS+ + +  T            DV L +
Sbjct: 177 SDARPQPVAIEMDDVALMTYTSGTTGLPKGAMLSYGNALFKTRAAADCNGVGPADVLLSI 236

Query: 175 MPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMT 234
            PL H   M          GA  V       ++V +AI  +KV+    + +  +   +  
Sbjct: 237 APLYHIAGMLMGVNVPVLSGATSVLLHRFDPRAVLQAIASFKVSWWYSI-APMNVACMQV 295

Query: 235 KDLIRKYSEQLNFIEFGSAHFPFEDK--KQVAEWFPN-TNVVMHYGLTEVSRA-TFIDFH 290
            D+       L      S    F +   +Q     PN T+    YGL+E     T+   H
Sbjct: 296 PDIAGFDLSSLKMNPVTSFGITFTEPLAQQWRSHAPNCTSFEAAYGLSETHTCDTYTPHH 355

Query: 291 NDDINAVGHRYRGADFKIIDNKG-AEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVEG 349
                  G    G   +IID +  A++  GE GEIV  +P    GY+   + T+     G
Sbjct: 356 APRWGTQGIAVPGVTIRIIDTETQADMPAGEVGEIVLTSPGSFKGYWNKPEATAATLRNG 415

Query: 350 YFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDAN 408
           +  TGD+G++  D YL   GR KE+I V G  V P++VE +L +   V + A  A  DA 
Sbjct: 416 WVHTGDMGKLDADGYLTFIGRFKEMIKVSGYSVFPEEVETILIKHPAVAQAAVIAQPDAE 475

Query: 409 MGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
            GEVV+A+IV K G   E     +       +  +  P+  S + ALP T +GKV R  L
Sbjct: 476 KGEVVKAFIVRKPGAALE--ADALVAWARDNMASYKAPRAVSFIDALPTTGAGKVLRRLL 533

Query: 469 SSE 471
             +
Sbjct: 534 KDK 536