Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  140 bits (354), Expect = 8e-38
 Identities = 127/478 (26%), Positives = 219/478 (45%), Gaps = 37/478 (7%)

Query: 22  ENDRTISYENLASDIKKTAAKLVSLGVTSEDAV-LVRSNNSYSFILLYFSIH-------- 72
           E  + ++Y  LA   ++ AA L   G    D + +V  N   +  LL  ++H        
Sbjct: 29  ETGQHLTYGELARGCRRVAAVLHGAGARPGDTISVVMPNGLQTLRLLLGAMHGGLRVNPV 88

Query: 73  --------------YVGAKFVNVAPDSDVSYVSFIE--DKVNPKLFIEKSQDFIRNIDSY 116
                         +   + V VAP+ +      ++  D+    L ++   + +      
Sbjct: 89  NLLSQPEQMRYVLAHADCRVVCVAPEWEARVREIVQAFDRPVTVLVVDPEAEVLPGETEA 148

Query: 117 TFDNIFPPQARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMP 176
               + PP    +A +M+TSGTTG PKGV+LS ++L      I +     + D  L ++P
Sbjct: 149 PAVAVPPPLPDAVALLMYTSGTTGMPKGVMLSQRNLAANAYAISAEHGLRSSDRVLAVLP 208

Query: 177 LSHSFAMA-RMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTK 235
           L H  A    M   L  GG++ +   F   +   +A +  + + + LVP+  SY+    K
Sbjct: 209 LYHINAFTVTMLAPLAHGGSLAMPPKFSAGRFWEQATQT-QCSWINLVPTMISYLLEGPK 267

Query: 236 DLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATF---IDFHND 292
             + + +  + F    SA  P E  +   + F    +V   GLTE +  +F   +D    
Sbjct: 268 PPLAQ-TLAIRFCRSASAALPPEHLRAFEQKF-GIGIVETMGLTETAAPSFSNPMDPAAR 325

Query: 293 DINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFV-EGYF 351
            + +VG R  G    ++D K + V +G  GE+V + P ++ GY++N + T   F  +G+ 
Sbjct: 326 KLGSVG-RASGCMAGVVDAKLSAVPDGVTGELVIRGPNVMLGYYKNEEATRASFTPDGWL 384

Query: 352 KTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMG 410
           +TGDLG    D + F+TGR+KE+I  GG+ ++P ++++ L     V+E A   + D + G
Sbjct: 385 RTGDLGHRDEDGFFFVTGRIKELIIKGGENIAPREIDEALMRHPAVREAAAVGVPDRHYG 444

Query: 411 EVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
           + +   IV++ G  C      ++      L  +  P  Y  V+ LP+  SGKVQR KL
Sbjct: 445 QEIGVCIVLREGCACTE--DELRAFGAEALGRYKTPGHYRFVNDLPRGPSGKVQRLKL 500