Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  126 bits (316), Expect = 2e-33
 Identities = 124/514 (24%), Positives = 216/514 (42%), Gaps = 54/514 (10%)

Query: 1   MSVVERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNN 60
           M + + +    +  PD +AV    RT S+ + A  + + A  L  LG+   D V + + N
Sbjct: 1   MYLTQSLHRSVQQHPDKVAVRFAGRTRSFRDYADRVARLAGALRRLGMQPGDRVAMLALN 60

Query: 61  SYSFILLYFSIHYVG------------AKFVNVAPDSDVSYVSFIEDKVNPKLFIEKSQD 108
           S  ++    ++ + G            A+ +    DS  S +  +++  N +  +E+ + 
Sbjct: 61  SDRYLEYQMAVPWGGGVLNPCNIRWSAAEILYSLEDSG-STILLVDE--NFRALVEQMRG 117

Query: 109 FIRNIDS--YTFDNIFPPQARG--------------------IADIMFTSGTTGEPKGVL 146
              ++    Y  D   P    G                    +A I +T GTTG PKGV+
Sbjct: 118 QATSLREVIYCGDGALPAGMHGYEALIDAAAPVPDTARRDEDLAGIFYTGGTTGFPKGVM 177

Query: 147 LSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLK 206
           LSH ++  +    +       +   L   P+ H   M       F G   V+  SF   +
Sbjct: 178 LSHTNICSSGFAALGEGLAPPDSSYLHAAPMFHLADMGLATPHWFQGSTHVIVPSFSP-E 236

Query: 207 SVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEW 266
           +V  AI   +VT   LVP+    +         +    L  I +G++        +  E 
Sbjct: 237 AVLNAIAADRVTHALLVPTMIQMLVDHPSMREPRDLRSLRCITYGASPISEAVLNRAMEA 296

Query: 267 FPNTNVVMHYGLTEVSRATFIDFHNDD---------INAVGHRYRGADFKIIDNKGAEVI 317
           FP       YG+TE+S    I+  ++          + + G      + +I+D  GAEV 
Sbjct: 297 FPGVEFAQAYGMTELSPIATINPPSNHTAEGRKRGKLRSAGRASYCMEVRIVDADGAEVP 356

Query: 318 EGEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINV 376
            G  GE+  + P ++ GY+   + T+    +G+  TGD   +  D Y+F+  RLK++I  
Sbjct: 357 RGTVGEVAVRGPNVMQGYWNKPEQTAAAVRDGWMHTGDGAYMDDDGYIFVVDRLKDMIIS 416

Query: 377 GGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDC--ENVISNIKE 434
           GG+ V   +VE  +++   V  CA   +     GE V A +V+K G     E +I++ K 
Sbjct: 417 GGENVYSAEVENAINQHPAVAACAVIGIPSDEWGEAVHAALVLKPGQGIRPEELIAHCKT 476

Query: 435 TINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
            I      +  P+  +++ ALP + +GKV + KL
Sbjct: 477 LI----ASYKCPRSVAVLDALPLSGAGKVLKTKL 506