Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  122 bits (305), Expect = 4e-32
 Identities = 124/500 (24%), Positives = 214/500 (42%), Gaps = 62/500 (12%)

Query: 19  AVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGA-- 76
           AV   D  + +      + +  A L  LG+   D V + S NS+ F+  +F   + G   
Sbjct: 19  AVVCGDTRLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVI 78

Query: 77  ---------KFVNVAPDSDVSYVSFIEDKVNPKLFIEKSQDFIRNIDSYTFDNIFPPQAR 127
                    K V  + D   + +  ++D   P     +          Y  D   P    
Sbjct: 79  NPVNIRWNPKEVAYSLDDCDTRILLVDDVFAPMAAELRGLSSSLRTVVYCGDGAVPEGMV 138

Query: 128 G--------------------IADIMFTSGTTGEPKGVLLSHKSLVL-ATEHIISHVKNT 166
           G                    +A +M+T GTTG+PKGV+L+H SL + A   + +  ++T
Sbjct: 139 GYEALLAATDPAEDAPHDSDELAAVMYTGGTTGQPKGVMLTHGSLCINALGTVAALPRDT 198

Query: 167 NEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSA 226
            +   ++  P+ H         SL     + V   F +L +V + ++  ++T + LVP+ 
Sbjct: 199 QDAAAIVAAPMFHVAGCGVALQSLMRLVPVHVVPVFDEL-AVLRTLQSARITEMFLVPT- 256

Query: 227 WSYITLMTKDLIR--KYSE----QLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTE 280
                 M K +I   +++E     L  + +G+A        Q    FP T     YG+TE
Sbjct: 257 ------MIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMRAFPGTAFAQVYGMTE 310

Query: 281 VSR-ATFIDFH--------NDDINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWM 331
           +S   T +  H           + + G     A+ +I+D    EV  G+ GEIV + P +
Sbjct: 311 LSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEVPFGQVGEIVARGPMV 370

Query: 332 LDGYFENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVL 390
           + GY+   + T      G+  TGD G +  + ++F+  R+K++I  GG+ V   +VE  +
Sbjct: 371 MKGYWNKPKETEAALRGGWMHTGDGGYMDEEGFVFVVDRMKDMIVSGGENVYSAEVENAI 430

Query: 391 SEALGVQECACAALSDANMGEVVQAYIVVKSGW--DCENVISNIKETINGQLPMHMRPKK 448
           ++   V   A   + D   GE V A IV + G   + E VI++ +E I G    +  P+ 
Sbjct: 431 AQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHCREQIAG----YKCPRS 486

Query: 449 YSIVSALPKTVSGKVQRYKL 468
                ALP + +GK+Q+++L
Sbjct: 487 VEFRDALPLSAAGKLQKFQL 506