Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., AMP-binding protein from Variovorax sp. OAS795

 Score =  152 bits (383), Expect = 3e-41
 Identities = 124/471 (26%), Positives = 216/471 (45%), Gaps = 42/471 (8%)

Query: 25  RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYVGA-------- 76
           R  ++  LA  + + AA L   G+   D V + + NS   +    +  ++GA        
Sbjct: 29  RRQTHVQLAGSVARQAAALARRGIARGDRVALLAPNSDQLVSAILACWWLGAVACPLNVR 88

Query: 77  ----KFVNVAPDSDVSYVSFIEDKV--------NPKLFIEKSQDFIRNIDSYTFDNIFPP 124
               +  +   DS+ S +  ++D +         P L +   ++     ++   + +   
Sbjct: 89  WSTPELAHALQDSEASLL-LVDDSLLTLAPAGETPLLRLGALEE-----EAAALEPLADT 142

Query: 125 QARG--IADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFA 182
           +  G  +A I++T GTTG  KGV+LSH +   A+    + + N  + V LL+ PL H   
Sbjct: 143 RTGGDALAAILYTGGTTGRSKGVMLSHANFWTASMTRGAELNNAPDSVSLLVAPLFHVAG 202

Query: 183 MARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS 242
           + R+   L  GG+ V    F+   +V +AI  +++  + +VPS    + L       +  
Sbjct: 203 LGRLVGQLIVGGSCVTMAQFRPA-AVIEAIAEHRIGDIIVVPSMLQSL-LDDPSFTAERV 260

Query: 243 EQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDF---HNDD------ 293
             L  I FG+A  P +   +    +P+      YGLTE + A  I+    H  +      
Sbjct: 261 RSLTRIAFGAAPMPPDLLDRALAAWPHAEFFQAYGLTETAGAVCINLPANHRPEARALGR 320

Query: 294 INAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKT 353
           +NAVG    GA+  + D  G E+  GE GEI+ + P ++ GY+ N + T+    +G+ +T
Sbjct: 321 LNAVGRAGLGAEIIVADESGRELPRGEVGEILARGPMVMRGYWRNPEATAAALRDGWLRT 380

Query: 354 GDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEV 412
           GD GR++ D YLF+  RLK++I  GG+ V   +VE  L     V++ A   + D   GE 
Sbjct: 381 GDAGRMLDDGYLFIVDRLKDMIISGGENVYCAEVEAALRSHPQVRQAAVIGVPDVRWGEA 440

Query: 413 VQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKV 463
           V A +V+    +       ++     +L  +  P+  S +  LP + +GKV
Sbjct: 441 VHAAVVLAG--EGAATADELRAWCRERLAGYKCPRAVSFMRELPLSAAGKV 489