Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  108 bits (270), Expect = 4e-28
 Identities = 125/502 (24%), Positives = 208/502 (41%), Gaps = 67/502 (13%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYV 74
           P+ +AV +    +++  L     + A+ L++ G+ + + V + + N    +    + +  
Sbjct: 15  PERLAVIDRHTRLTFAQLEQRANQLASALLAQGIATGEHVAILAPNRAELVEAEVAFYKA 74

Query: 75  GAKFVNV----APD------SDVSYVSFIEDKVNPKLFIEKSQD---------------- 108
           G   V V    APD      +D   V+ I D    +  + + Q+                
Sbjct: 75  GLVKVPVNARLAPDEVIQVLNDACSVALIADAQLAQALLARRQEVPALRLIVTLGERGGD 134

Query: 109 -----FIRNIDSYTFDNIFPPQARGIADIMFTSGTTGEPKGVLLS--------HKSLVLA 155
                 +    S       P  A  +A + +TSG++G  K  +LS         KSL   
Sbjct: 135 ITYAALLAQGSSQPISCDLPDDA--LAVLHYTSGSSGVLKAAMLSVGNRKALIRKSLASP 192

Query: 156 TEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFY 215
           T       +    DV   + P++H+  M  M   L A GA  +       + + + I+  
Sbjct: 193 TR------RAAPGDVMAHVGPITHASGMQLM--PLLAVGACNLLLERYDDQLLLETIQRE 244

Query: 216 KVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMH 275
            VT L LVP+  + +     D+ R     L  + +G+A       K+  E F    +   
Sbjct: 245 GVTRLFLVPAMINRLVNFP-DVERYDLSSLRLVMYGAAPMAPALVKRAIEVF-GPILAQG 302

Query: 276 YGLTEVSRATFIDFHNDDI---------NAVGHRYRGADFKIIDNKGAEVIEGEEGEIVF 326
           YG  E      +    D +          + G  Y   D +++++   +V  GE GEIV 
Sbjct: 303 YGAGETCSLVTVLTEQDHLCEGGDYRRLASCGRCYFETDLRVVNDHFQDVQPGEVGEIVV 362

Query: 327 KAPWMLDGYFENSQLTSDCFVEGYFKTGDLGRV-VGDYLFLTGRLKEIINVGGKKVSPDQ 385
           K P ++ GY+    LT++   +GY+ TGDL  V    Y+F+  R KE+I  GG  + P +
Sbjct: 363 KGPDIMQGYWRAPHLTAEVMRDGYYLTGDLATVDEQGYVFIVDRKKEMIISGGFNIYPSE 422

Query: 386 VEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDC--ENVISNIKETINGQLPMH 443
           VE+VL     V E A   + D   GE V+A IV+K G     ++VI +  + + G     
Sbjct: 423 VEQVLYSMPQVFEAAVVGVPDEQWGEAVRAVIVLKPGMALQEQDVIEHCAQALAG----F 478

Query: 444 MRPKKYSIVSALPKTVSGKVQR 465
            +P+    VS LPK  +GKV R
Sbjct: 479 KKPRAVDFVSELPKNPNGKVVR 500