Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., Long-chain-fatty-acid--CoA ligase LcfA from Pseudomonas protegens RBAN4

 Score =  120 bits (302), Expect = 9e-32
 Identities = 108/354 (30%), Positives = 167/354 (47%), Gaps = 26/354 (7%)

Query: 125 QARGIADIMFTSGTTGEPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMA 184
           QA  +A + +TSGTTG PKG + +H+SL ++     S  ++T E V L ++P  H   + 
Sbjct: 212 QADDLALLQYTSGTTGHPKGCMHTHRSL-MSNAVSGSWTQSTVESVGLGVVPFFHITGLV 270

Query: 185 R--MRTSLFAGGAIVVGCSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS 242
              +R    A   +++    ++L    + I  Y+VT        W+ I  M  DL     
Sbjct: 271 CFVLRAVFDATSTVIMPRWDRELAG--RLISRYRVTH-------WTCIPTMVIDLFASPH 321

Query: 243 EQ------LNFIEFGSAHFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFIDF-HNDDIN 295
            Q      L  I  G A  P    +++ + F  T  +  YGLTE + A+  +      + 
Sbjct: 322 YQDFELSSLVHINGGGAAMPEAVAQRLRQEFGLT-FLEGYGLTETAAASHGNPPERAKLQ 380

Query: 296 AVGHRYRGADFKIIDNKGAEVIE-GEEGEIVFKAPWMLDGYFENSQLTSDCFVE----GY 350
            +G  + G D +++D +  E +  GE GEI+   P +  GY+ N + T   FVE     +
Sbjct: 381 CLGMPFFGVDSRVVDPRTLEELAPGEVGEIITFGPMLFKGYWRNPEATEAAFVEFEGKRF 440

Query: 351 FKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANM 409
            +TGDLG +  + Y FLT RLK +IN  G KV P +VE +L +   V E    A  DA  
Sbjct: 441 LRTGDLGHMDEEGYFFLTDRLKRMINSSGFKVWPAEVEALLFKHPAVHEACVIATRDAYR 500

Query: 410 GEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKV 463
           GE V+A +V++S          I       +  +  P+    V +LPK+ SGKV
Sbjct: 501 GESVKALVVLRSEARGHTASEEIIAWAREHMAAYKVPRVLEFVDSLPKSGSGKV 554



 Score = 29.6 bits (65), Expect = 3e-04
 Identities = 21/78 (26%), Positives = 34/78 (43%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHYV 74
           PD +A      T+S+  L ++    A  L   GV   D V +   N   FI+  ++I   
Sbjct: 41  PDKVAYRFFGHTLSFAQLQAEALALAGWLQGEGVEPGDRVALYLQNCPQFIIACYAILRA 100

Query: 75  GAKFVNVAPDSDVSYVSF 92
            A  V + P + V  +S+
Sbjct: 101 NAVLVPINPMNKVQELSY 118