Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., Benzoate-CoA ligase (EC 6.2.1.25) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  128 bits (322), Expect = 4e-34
 Identities = 125/513 (24%), Positives = 224/513 (43%), Gaps = 57/513 (11%)

Query: 2   SVVERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNS 61
           ++ + +   ++  P   AV   D   +Y    + + + AA L  +GV   D V V + NS
Sbjct: 13  TIADALRRTAQRLPAKSAVVCGDTQWTYAEFDALVSRLAAGLARIGVAQGDKVAVLARNS 72

Query: 62  YSFILLYFSIHYVGAKFVNV---------------------APDSDVSYVS----FIEDK 96
           + F  L F++   GA  V +                     A DS ++ ++     ++ +
Sbjct: 73  HGFAALRFALARRGAVMVPINFMLKADEVAYILRHAGARTLATDSGLAELARAAAALDTQ 132

Query: 97  VNPKLFIEKSQDFIRNIDSYTFDNI------FPPQARG---IADIMFTSGTTGEPKGVLL 147
           V   L++            + FD +       P    G   +A I++TSGT   PKG +L
Sbjct: 133 VQQYLWLPSEDPSEPVAGMHRFDELAACTDPLPEVTLGSYDLAQIVYTSGTESTPKGAML 192

Query: 148 SHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCS----FK 203
           +H +++      + + +   +D  L  +PL H   +      +F G A+ +G S     K
Sbjct: 193 THDAVLWQYVSCVINAEIAEDDHALHALPLYHCAQL-----DVFFGPAVYIGSSNVITAK 247

Query: 204 QLK-SVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS-EQLNFIEFGSAHFPFEDKK 261
            +  ++   IE Y++T     P+ W  I L+   L        L    +G++  P E  K
Sbjct: 248 PVPDNLIALIEKYRITSFFAPPTVW--IALLRSPLFDATKLRSLAKGYYGASIMPVEVLK 305

Query: 262 QVAEWFPNTNVVMHYGLTEVSRATFIDFHNDDIN---AVGHRYRGADFKIIDNKGAEVIE 318
           ++A   P+  +   YG TE++    +   +D +    + G      + +++ +   +V  
Sbjct: 306 ELASRLPSVRLWNLYGQTEIAPLATMLGPDDQLRKPGSCGKAVINVETRVVSDDMRDVAV 365

Query: 319 GEEGEIVFKAPWMLDGYFENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRLKEIINVG 377
           GE GEIV ++P ++ GYF +   T   F   +F +GDL  +  + Y+ +  R K++I  G
Sbjct: 366 GEVGEIVHRSPHLMLGYFNDPDRTRAAFDGDWFHSGDLAVIDEEGYITVVDRKKDMIKTG 425

Query: 378 GKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDC--ENVISNIKET 435
           G+ V+  +VE+++     V E A   L D    E V A IVVK+G     + VI++    
Sbjct: 426 GENVASREVEEMVYRLPAVSEVAVIGLPDPKWVEAVTAVIVVKAGQALTEDEVIAH---- 481

Query: 436 INGQLPMHMRPKKYSIVSALPKTVSGKVQRYKL 468
            N  +     PK+     +LPK  SGK+ + +L
Sbjct: 482 CNRHMAAFKSPKRVVFSDSLPKNPSGKLLKREL 514