Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  100 bits (248), Expect = 1e-25
 Identities = 111/486 (22%), Positives = 202/486 (41%), Gaps = 40/486 (8%)

Query: 2   SVVERIFNHSESRPDCIAVYENDRTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNS 61
           ++++ + +++ +  D  AV ++    S+  L   +++ AA L +LGV   D V++ + N 
Sbjct: 7   TLIDLLAHNAVAHADRPAVIDDGAPQSHTMLCDAVQRQAAALSALGVGQGDRVVLVAGNR 66

Query: 62  YSFILLYFSIHYVGAKFV---------NVAPDS-DVSYVSFIEDKVNPKLFIEKSQDFIR 111
              +++  ++ ++GA  V          +A  S D + V  + D     L+      +  
Sbjct: 67  AEVLVMLGAVAWLGAMLVPLNLRLSPAEMAQQSRDAAPVLAVVDAACAPLWQATQAAWPE 126

Query: 112 NIDSYTF---------------DNIFPPQARGIAD-----IMFTSGTTGEPKGVLLSHKS 151
            +                        PP AR  A      ++FT+   G  +G +L+   
Sbjct: 127 GMPGVPVVALGAANWPSLACAGPTTAPPVARQDAPALGVLMLFTAAVEGHARGAVLAQSQ 186

Query: 152 LVLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKA 211
           L  +   I        +D  L ++PL H+  +      L AGG  V+   F    +   A
Sbjct: 187 LTASARQIGEVWSLGADDRWLGVLPLFHAAGIGLSLALLAAGGTCVLLPRFDPAAAA-AA 245

Query: 212 IEFYKVTGLGLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTN 271
           +E ++VT    V + ++ +     D  +     L  +  G    P   + ++A   P   
Sbjct: 246 VEQHQVT----VSATFAPMLGALLDAAQASGASLASLRIGMGLEPPATQARLAALCPGAG 301

Query: 272 VVMHYGLTEVSRATFIDFHNDDINAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWM 331
               YG  EVS    +   ++   A G     +  +I D  G  V  G EGEI  + P +
Sbjct: 302 FWSAYGQAEVSSMVCLGLQSERPGAAGRAVPPSQIRIQDAAGQPVATGMEGEIAVRGPTV 361

Query: 332 LDGYFENSQLTSDCFVEGYFKTGDLGRVVGD-YLFLTGRL--KEIINVGGKKVSPDQVEK 388
             GY++ +Q       + + +TGDLGR+  D +L+ TGR   K++I  GG+ V P +VE+
Sbjct: 362 FLGYWDAAQQRPFKPADPWHRTGDLGRLDEDGWLWFTGRAAHKQLIKSGGENVYPAEVEQ 421

Query: 389 VLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMRPKK 448
           VL E   V E       D   GE V A   +++G       + +   +  +L  + RP++
Sbjct: 422 VLLEHPAVAEAYVFGQPDEKWGEAVHAACALRAGATATE--AELIAFVEQRLARYKRPQR 479

Query: 449 YSIVSA 454
             + +A
Sbjct: 480 VRLQAA 485