Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  120 bits (302), Expect = 9e-32
 Identities = 126/525 (24%), Positives = 221/525 (42%), Gaps = 77/525 (14%)

Query: 15  PDCIAVYENDRTISYENLASDIKKTAAKLVSL-GVTSEDAVLVRSNNSYSFILLYFSIHY 73
           PD   +   D  +SY    ++ +  A  L  + GV   D VL+   NS  + L ++ I  
Sbjct: 35  PDKPFIVFYDTPLSYAQCLNEAEHIAGHLQQVCGVRPGDRVLLCMQNSPQWALAFYGILR 94

Query: 74  VGAKFVNVAPDSDV-----------SYVSFIEDKVNPKL--FIEKSQDFIRNIDSYTF-D 119
             A  V V P + V           + V+F+   + P+L   +    + +R++   T+ D
Sbjct: 95  ANAVVVPVNPMNRVEELRHCLSDSGAQVAFVAQDLLPQLQPLLTTEDEGLRHLVVATYSD 154

Query: 120 NIFPPQARGIADIM---------------------------------------FTSGTTG 140
           ++  P    + D +                                       +TSGTTG
Sbjct: 155 HLRVPTELRVPDFVAAPRLPVAGPGLVAWSDVVAAARTPGLLTAGPDDLCAMPYTSGTTG 214

Query: 141 EPKGVLLSHKSLVLATEHIISHVKNTNEDVELLLMPLSHSFAMA-RMRTSLFAGGAIVVG 199
            PKG + +H+S++      +     + + V L ++P  H   ++  +   L+AG  +VV 
Sbjct: 215 LPKGCMHTHRSVMSTLVGGVRWFGTSQDAVCLSVLPFFHVTGLSGSLNGPLYAGATLVVL 274

Query: 200 CSFKQLKSVFKAIEFYKVTGLGLVPSAWSYITLMTKDLIRKYS------EQLNFIEFGSA 253
             + +  +    ++ Y+VT        W  I+ M  D +            L  +  G A
Sbjct: 275 SRWDREVAAI-CMQRYRVT-------MWQAISTMVIDFLAHPQLDHFDLASLACVRGGGA 326

Query: 254 HFPFEDKKQVAEWFPNTNVVMHYGLTEVSRATFID-FHNDDINAVGHRYRGADFKIID-N 311
             P     ++ +     + +  YG++E   AT I+  H      +G      D +++D +
Sbjct: 327 AMPDAVAARL-QALTGQHYIEGYGMSETMAATHINPTHRPKPQCLGLPVFDVDARVLDPD 385

Query: 312 KGAEVIEGEEGEIVFKAPWMLDGYFENSQLTSDCFVE----GYFKTGDLGRVVGD-YLFL 366
             AE   GE GEIV   P ++ GY+ N Q TS+ F++     + +TGDLG V  + Y F+
Sbjct: 386 TLAERPIGETGEIVVHGPQLMQGYWRNPQATSEAFIDIDGKRFLRTGDLGHVDEEGYFFM 445

Query: 367 TGRLKEIINVGGKKVSPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCE 426
           T RLK +IN  G KV P +VE ++     +QE     + DA  GE V+A +V++      
Sbjct: 446 TDRLKRMINASGFKVWPAEVEALMYHHPAIQEACVIGVRDARRGETVKALVVLRPDQRGR 505

Query: 427 NVISNIKETINGQLPMHMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
               ++ +  +G +  +  P+    V  LP++ SGKV   +L  +
Sbjct: 506 ISEQDVIDWAHGHMAAYKSPRIVEFVETLPRSGSGKVMWRELQEQ 550