Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  123 bits (309), Expect = 1e-32
 Identities = 126/504 (25%), Positives = 219/504 (43%), Gaps = 54/504 (10%)

Query: 15  PDCIAVYEND-RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHY 73
           PD IAV +N   + +Y  L     + A  L+S G+   D V  +      F L+Y +   
Sbjct: 38  PDKIAVVDNHGASWTYAALDYAASRLANWLLSQGIQPGDRVAFQLPGWCEFTLIYLACLK 97

Query: 74  VGAKFVNVAPDSDVSYVSFIEDKVNPKLFIEKS--------------QDFIRNID----- 114
            GA  V + P    + + ++ +K   K+F   +              Q+ +R++      
Sbjct: 98  TGAVSVPLLPAWREAELVWVLNKCQAKIFFAPTVFKQNRPVDLILPLQNQLRHLTHIVGV 157

Query: 115 ------------SYTFDNIFPPQAR------GIADIMFTSGTTGEPKGVLLSHKSLVLAT 156
                       S   D   P Q+        +A ++FTSGT G PKGV+L+H +++ + 
Sbjct: 158 DKLAPATTALALSQIIDRSEPLQSDINIHGDELAAVLFTSGTEGMPKGVMLTHNNILASE 217

Query: 157 EHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYK 216
               + +  T +DV L+  PL H+       T+ F  GA  V       ++    +   +
Sbjct: 218 RAYCARLNLTWQDVFLMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPEACLTLLAQQR 277

Query: 217 VTGL-GLVPSAWSYITLMTKDLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNVVMH 275
            T + G  P  +  +  + +      S  L F   G    P +  +   +      ++  
Sbjct: 278 CTCMSGATPFIYDLLCAIEQQPADLSS--LRFFLCGGTTIPKKVARDCQQ--RGIKLLSI 333

Query: 276 YGLTEVSRATFIDFHNDD---INAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFKAPWML 332
           YG TE S  + ++  +     +N  G+   G + KI+D     +  G EGE   + P + 
Sbjct: 334 YGSTESSPHSMVNLGDSTSRMMNTDGYAATGVEIKIVDEDRNTLPAGHEGEEASRGPNVF 393

Query: 333 DGYFENSQLTSDCF-VEGYFKTGDLGRVVGD-YLFLTGRLKEIINVGGKKVSPDQVEKVL 390
            GY +  +LT+     EG++ +GDL R+  D Y+ +TGR K+II  GG+ +S  +VE +L
Sbjct: 394 MGYLDEPELTARALDNEGWYYSGDLCRMDEDGYIKITGRKKDIIIRGGENISSREVEDIL 453

Query: 391 SEALGVQECACAALSDANMGEVVQAYIVVKS---GWDCENVISNIKETINGQLPMHMRPK 447
            +   + +    A+ D  +GE   AY+V+K        E VI+        ++  +  P+
Sbjct: 454 LQHPRIHDACVVAMPDERLGERSCAYVVLKPPHLSLTLEEVIAFFSRK---RVAKYKYPE 510

Query: 448 KYSIVSALPKTVSGKVQRYKLSSE 471
           +  IV  LP+T SGKVQ++ L  +
Sbjct: 511 RIVIVEKLPRTASGKVQKFLLRQD 534