Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., short chain acyl-CoA synthetase, anaerobic (RefSeq) from Escherichia coli BW25113

 Score =  124 bits (312), Expect = 6e-33
 Identities = 118/510 (23%), Positives = 221/510 (43%), Gaps = 58/510 (11%)

Query: 11  SESRPDCIAVYEND-RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYF 69
           + + PD IAV +N   + +Y  L       A  +++ G+ S D +  +      F ++Y 
Sbjct: 34  ARAMPDKIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYL 93

Query: 70  SIHYVGAKFVNVAPDSDVSYVSFIEDKVNPKLFIE-------KSQDFIRNI--------- 113
           +   +GA  V + P    + + ++ +K   K+F         +  D I  +         
Sbjct: 94  ACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQ 153

Query: 114 ---------------------DSYTFDNIFPPQARGIADIMFTSGTTGEPKGVLLSHKSL 152
                                D+ +           +A ++FTSGT G PKGV+L+H ++
Sbjct: 154 IVGVDKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNI 213

Query: 153 VLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAI 212
           + +     + +  T +DV ++  PL H+       T+ F  GA  V        +    +
Sbjct: 214 LASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALL 273

Query: 213 EFYKVT-GLGLVPSAWSYITLMTK---DLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFP 268
           E  + T  LG  P  +  + ++ K   DL       L F   G    P +  ++  +   
Sbjct: 274 EQQRCTCMLGATPFVYDLLNVLEKQPADL-----SALRFFLCGGTTIPKKVARECQQ--R 326

Query: 269 NTNVVMHYGLTEVSRATFIDFHNDD-----INAVGHRYRGADFKIIDNKGAEVIEGEEGE 323
              ++  YG TE S    ++   DD     ++  G+   G + K++D+    +  G EGE
Sbjct: 327 GIKLLSVYGSTESSPHAVVNL--DDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGE 384

Query: 324 IVFKAPWMLDGYFENSQLTSDCF-VEGYFKTGDLGRV-VGDYLFLTGRLKEIINVGGKKV 381
              + P +  GYF+  +LT+     EG++ +GDL R+    Y+ +TGR K+II  GG+ +
Sbjct: 385 EASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENI 444

Query: 382 SPDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLP 441
           S  +VE +L +   + +    A+SD  +GE   AY+V+K+     ++   +      ++ 
Sbjct: 445 SSREVEDILLQHPKIHDACVVAMSDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVA 504

Query: 442 MHMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
            +  P+   ++  LP+T SGK+Q++ L  +
Sbjct: 505 KYKYPEHIVVIEKLPRTTSGKIQKFLLRKD 534