Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECRC62

 Score =  121 bits (303), Expect = 6e-32
 Identities = 117/506 (23%), Positives = 217/506 (42%), Gaps = 58/506 (11%)

Query: 15  PDCIAVYEND-RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYFSIHY 73
           PD IAV +N   + +Y  L       A  +++ G+ S D +  +      F ++Y +   
Sbjct: 2   PDKIAVVDNHGASYTYSALDHAASCLANWMLAKGIESGDRIAFQLPGWCEFTVIYLACLK 61

Query: 74  VGAKFVNVAPDSDVSYVSFIEDKVNPKLFIE-------KSQDFIRNI------------- 113
            GA  V + P    + + ++ +K   K+F         +  D I  +             
Sbjct: 62  TGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGV 121

Query: 114 -----------------DSYTFDNIFPPQARGIADIMFTSGTTGEPKGVLLSHKSLVLAT 156
                            D+ +           +A ++FTSGT G PKGV+L+H +++ + 
Sbjct: 122 DKLAPATSSLSLSQIIADNTSLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASE 181

Query: 157 EHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAIEFYK 216
               + +  T +DV ++  PL H+       T+ F  GA  V        +    +E  +
Sbjct: 182 RAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQR 241

Query: 217 VT-GLGLVPSAWSYITLMTK---DLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFPNTNV 272
            T  LG  P  +  + ++ K   DL       L F   G    P +  ++  +      +
Sbjct: 242 CTCMLGATPFVYDLLNVLEKQPADL-----SALRFFLCGGTTIPKKVARECQQ--RGIKL 294

Query: 273 VMHYGLTEVSRATFIDFHNDD-----INAVGHRYRGADFKIIDNKGAEVIEGEEGEIVFK 327
           +  YG TE S    ++   DD     ++  G+   G + K++D+    +  G EGE   +
Sbjct: 295 LSVYGSTESSPHAVVNL--DDPLSRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEEASR 352

Query: 328 APWMLDGYFENSQLTSDCF-VEGYFKTGDLGRV-VGDYLFLTGRLKEIINVGGKKVSPDQ 385
            P +  GYF+  +LT+     EG++ +GDL R+    Y+ +TGR K+II  GG+ +S  +
Sbjct: 353 GPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSRE 412

Query: 386 VEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPMHMR 445
           VE +L +   + +    A+ D  +GE   AY+V+K+     ++   +      ++  +  
Sbjct: 413 VEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAKYKY 472

Query: 446 PKKYSIVSALPKTVSGKVQRYKLSSE 471
           P+   ++  LP+T SGK+Q++ L  +
Sbjct: 473 PEHIVVIEKLPRTASGKIQKFLLRKD 498