Pairwise Alignments

Query, 471 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., medium-chain fatty-acid--CoA ligase from Escherichia coli ECOR38

 Score =  124 bits (312), Expect = 6e-33
 Identities = 119/509 (23%), Positives = 223/509 (43%), Gaps = 56/509 (11%)

Query: 11  SESRPDCIAVYEND-RTISYENLASDIKKTAAKLVSLGVTSEDAVLVRSNNSYSFILLYF 69
           + + PD IAV +N   + +Y  L       A  +++ G+ S D +  +      F ++Y 
Sbjct: 34  ARAMPDKIAVVDNHGASYTYSALDHAASCLANWMLTKGIESGDRIAFQLPGWCEFTVIYL 93

Query: 70  SIHYVGAKFVNVAPDSDVSYVSFIEDKVNPKLFIE-------KSQDFIRNIDSYT----- 117
           +   +GA  V + P    + + ++ +K   K+F         +  D I  + +       
Sbjct: 94  ACLKIGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQ 153

Query: 118 ---FDNIFPPQAR----------------------GIADIMFTSGTTGEPKGVLLSHKSL 152
               D + P  +                        +A ++FTSGT G PKGV+L+H ++
Sbjct: 154 IVGVDKLAPATSSLSLSQIIADNTPLTTAITVHGDELAAVLFTSGTEGLPKGVMLTHNNI 213

Query: 153 VLATEHIISHVKNTNEDVELLLMPLSHSFAMARMRTSLFAGGAIVVGCSFKQLKSVFKAI 212
           + +     + +  T +DV ++  PL H+       T+ F  GA  V        +    +
Sbjct: 214 LASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPAACLALL 273

Query: 213 EFYKVT-GLGLVPSAWSYITLMTK---DLIRKYSEQLNFIEFGSAHFPFEDKKQVAEWFP 268
           E  + T  LG  P  +  + L+ K   DL       L F+  G    P +  ++  +   
Sbjct: 274 EQQRCTCMLGATPFVYDLLNLLEKQPADL-----SALRFLLCGGTTIPKKVARECQQ--R 326

Query: 269 NTNVVMHYGLTEVSRATFIDFHNDDI----NAVGHRYRGADFKIIDNKGAEVIEGEEGEI 324
              ++  YG TE S    ++  ND +    +  G+   G + K++D+    +  G EGE 
Sbjct: 327 GIKLLSVYGSTESSPHAVVNL-NDPLPRFMHTDGYAAAGVEIKVVDDARKTLPPGCEGEE 385

Query: 325 VFKAPWMLDGYFENSQLTSDCF-VEGYFKTGDLGRV-VGDYLFLTGRLKEIINVGGKKVS 382
             + P +  GYF+  +LT+     EG++ +GDL R+    Y+ +TGR K+II  GG+ +S
Sbjct: 386 ASRGPNVFMGYFDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENIS 445

Query: 383 PDQVEKVLSEALGVQECACAALSDANMGEVVQAYIVVKSGWDCENVISNIKETINGQLPM 442
             +VE +L +   + +    A+ D  +GE   AY+V+K+     ++   +      ++  
Sbjct: 446 SREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLSLEEVVAFFSRKRVAK 505

Query: 443 HMRPKKYSIVSALPKTVSGKVQRYKLSSE 471
           +  P+   ++  LP+T SGK+Q++ L  +
Sbjct: 506 YKYPEHIVVIEKLPRTASGKIQKFLLRKD 534