Pairwise Alignments

Query, 271 a.a., sugar ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 233 a.a., ABC transporter from Variovorax sp. SCN45

 Score =  199 bits (506), Expect = 4e-56
 Identities = 105/231 (45%), Positives = 152/231 (65%), Gaps = 3/231 (1%)

Query: 23  IELSNVNLHYPVPGHFSHSLQTTISSKIGGVLGSSSAKDKEMKYVHALRDINLKLEDSSR 82
           I L NV++ +P+ G  S SL+ T+++    V G    K+  +  V AL  +NL+L    R
Sbjct: 4   ISLKNVSVSFPIYGAGSASLKKTLAAS---VTGGRFGKETGVTVVQALSGLNLELRSGDR 60

Query: 83  LGIIGHNGAGKTTLLRLLSQVYPPTSGKVTIEGKISALTDFTLGMDPNATGLKNIEFRLV 142
           LG+IGHNGAGK+TLLR L+ VY P+SG+ T +G +++L D  LG++ +ATG++NI  R +
Sbjct: 61  LGLIGHNGAGKSTLLRTLAGVYEPSSGEFTRQGSVASLIDPALGIEMDATGVENIMLRGL 120

Query: 143 FMGCTFKEAQQAVEEIVAFSELGEFINLPVRTYSTGMFLRLAFAISTHFTPDILILDEVI 202
            MG + KE  +   EI  FS LGE++N+PVRTYSTGM +RLAF+IST    DIL++DE +
Sbjct: 121 VMGMSKKEVDRLTPEICEFSGLGEYVNMPVRTYSTGMMMRLAFSISTSVEADILLMDEWL 180

Query: 203 GAGDETFREKALSRLESLIKKSRMVVLSSHDLNAIKQYCDQAIVMEKGEIV 253
             GD  F EKA  R+  ++ KS ++VL+SH    I + C++ I +E G IV
Sbjct: 181 SVGDAAFTEKAEKRMRDVVSKSGILVLASHSPELIAKECNRVIHLEHGRIV 231