Pairwise Alignments

Query, 271 a.a., sugar ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 217 a.a., Capsular polysaccharide ABC transporter, ATP-binding protein KpsT from Sphingobium sp. HT1-2

 Score =  112 bits (279), Expect = 9e-30
 Identities = 70/199 (35%), Positives = 104/199 (52%), Gaps = 6/199 (3%)

Query: 68  HALRDINLKLEDSSRLGIIGHNGAGKTTLLRLLSQVYPPTSGKVTIEGKISALTDFTLGM 127
           H LR I+  +    ++G +G NGAGK+TL+R++S    P SG VT    +S    F    
Sbjct: 19  HVLRGIDFSISKGEKVGFLGRNGAGKSTLIRIISGAELPDSGSVTRTMSVSWPLAFGGAF 78

Query: 128 DPNATGLKNIEFRLVFMGCTFKEAQQAVEEIVAFSELGEFINLPVRTYSTGMFLRLAFAI 187
               TG+ N+ F     G       + VEE   F+ELG  +  P+R+YS GM  RLAFAI
Sbjct: 79  QNALTGVDNLRFICRIYGADLAGKLEYVEE---FTELGRDLYEPLRSYSAGMRARLAFAI 135

Query: 188 STHFTPDILILDEVIGAGDETFREKALSRLESLIKKS-RMVVLSSHDLNAIKQYCDQAIV 246
           S     D  ++DEV   GD+ F+ K    +E   K++ R ++  SH+   +K +CD+  V
Sbjct: 136 SMVIEFDCFLIDEVFAVGDDRFQRKC--HVELFEKRADRAMIFVSHNEWFVKDHCDRIAV 193

Query: 247 MEKGEIVFNGTPQSCIDYY 265
           ++KG  V   T +   +YY
Sbjct: 194 LDKGLAVSCETVEESYEYY 212