Pairwise Alignments

Query, 271 a.a., sugar ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., Polysialic acid transport ATP-binding protein KpsT from Escherichia fergusonii Becca

 Score =  120 bits (302), Expect = 2e-32
 Identities = 65/204 (31%), Positives = 114/204 (55%), Gaps = 9/204 (4%)

Query: 68  HALRDINLKLEDSSRLGIIGHNGAGKTTLLRLLSQVYPPTSGKVTIEGKISALTDFTLGM 127
           +  +D+N+++     +  IG NGAGK+TLLR++  +  P SGK+     IS       G 
Sbjct: 19  YVFKDLNIEIPSGKSVAFIGRNGAGKSTLLRMIGGIDRPDSGKIITNKTISWPVGLAGGF 78

Query: 128 DPNATGLKNIEFRLVFMGCTFKEAQQAVEEIVAFSELGEFINLPVRTYSTGMFLRLAFAI 187
             + TG +N++F +  +    +E ++ +E +  F+ELG++ ++P++TYS+GM  RL F +
Sbjct: 79  QGSLTGRENVKF-VARLYAKQEELKEKIEFVEEFAELGKYFDMPIKTYSSGMRSRLGFGL 137

Query: 188 STHFTPDILILDEVIGAGDETFREKALSRLESLIKKSRMVVLSSHDLNAIKQYCDQAIVM 247
           S  F  D  I+DEV   GD  F+EK     +   K+S  +++ SH LN++K++CD A+ +
Sbjct: 138 SMAFKFDYYIVDEVTAVGDARFKEKCAQLFKERHKESSFLMV-SHSLNSLKEFCDVALFI 196

Query: 248 EKGEIVFNGTPQSCIDYYLNSVKK 271
            +         Q+C+   +N   K
Sbjct: 197 SRDH-------QTCLYQNINEAIK 213