Pairwise Alignments

Query, 264 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., Lipopolysaccharide ABC export system, permease protein from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 5e-14
 Identities = 48/201 (23%), Positives = 96/201 (47%), Gaps = 32/201 (15%)

Query: 32  SRYSRSKFGQTWLSITMFVQILCIGLIWSLIWRM---GVDD---YLPYVGVGHIIYLFYT 85
           SR++RSK G  W+ I    Q+    LI S +      G+D+   Y  Y+  G + +  + 
Sbjct: 25  SRFARSKLGGLWMIIHPLAQVAIYALILSNVLAAKLPGIDNKYAYALYLMAGILAWNLFA 84

Query: 86  QTINESTGIFVADARVYLNDRQPFM----LSVGAHIYRNVLI---------LLHNIPTIF 132
           + ++    +F+    +    R P +    + VG+ +  NVL+         LL + PT  
Sbjct: 85  EIVSRCLTLFIEQGNIMKKMRFPRITLPVIVVGSCLLNNVLLFAAVMLVFSLLGHYPT-- 142

Query: 133 LLVIWSSSANFEFSFMFVISLSLSLFFVLFASYFCAVISTRFRDLIQLIGLLMQLAFFVS 192
           L ++W          M V++LS+ +  VL       +++   RD+ Q++ +++Q+ F+ +
Sbjct: 143 LQILWLIPL-----VMIVVALSVGIGLVL------GILNVFLRDVGQVVPIVLQVLFWFT 191

Query: 193 PVMWKVSFLPEQYQNYVYINP 213
           P+++ V+ +PE  +  +  NP
Sbjct: 192 PIVYMVNVIPEHLRATLSFNP 212