Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., Biofilm PGA synthesis deacetylase PgaB (EC 3.-) from Variovorax sp. SCN45

 Score = 49.7 bits (117), Expect = 4e-10
 Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 30/223 (13%)

Query: 356 IRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRFIIITVD 415
           +R   E+    T +    L + F  L+  G+  ++ + + +     +  P  R +++T D
Sbjct: 59  VRASFEQSPDETAIDDSTLAEVFAWLQFSGYHPVSLQQIVDARAGGKPLPA-RPVLLTFD 117

Query: 416 DGYRDNYDLLLPLLKKYQFKAVVYVVTG--ENFNRWDVEVSDNPEKVVPLMSPEQVKALH 473
           DGYR  Y  + PLLK+Y + A+  +VT   +      V   D P      +   +V  + 
Sbjct: 118 DGYRSAYTKVFPLLKRYNYPALFALVTSWLDVPEGQLVHWGDKPAPRENFLLWPEVAEMA 177

Query: 474 DSGLVEIGGHT-------------------MTHPFLSKLSESEQRE--------EILRNK 506
            SGL E   HT                    TH +  K    E  +        ++ R++
Sbjct: 178 RSGLAEFASHTDAMHTGILANPQGNMLPAAATHRYDPKTGRYEDDDAYVRRVEADLRRSR 237

Query: 507 LELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSG 549
             +EA  G  + +  +PYG ++  + + +   G P     + G
Sbjct: 238 EIIEARTGARVRATVWPYGAYNTAALEASARAGMPITFTLDDG 280