Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., polysaccharide deacetylase family protein from Magnetospirillum magneticum AMB-1

 Score = 50.1 bits (118), Expect = 1e-10
 Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 18/167 (10%)

Query: 401 HRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKV 460
           H    GK  +++T+DDG+  N+ +   +L     KA+ +V  G      D++ +D    +
Sbjct: 71  HAPPDGKAPVLLTLDDGFLSNFLVAREILDPQGIKALFFVCPG----LVDMKQADRIAAI 126

Query: 461 -------------VPLMSPEQVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKL 507
                        + LM  EQ+K L  SG  EIG H+  H  L+ L       E+   K 
Sbjct: 127 GTNVFRGRRGAEGLDLMDWEQLKELAASGH-EIGCHSARHVALAGLQAGVLEGEVGGAKA 185

Query: 508 ELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMH 554
            + A++G   + FA+P+GD  +        +G  FA+  +    L H
Sbjct: 186 RMAAVLGRVSSWFAFPFGDVASIDGAALGAIGRHFALCRSGVRGLAH 232