Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., polysaccharide deacetylase family protein from Serratia liquefaciens MT49

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 61/253 (24%), Positives = 116/253 (45%), Gaps = 35/253 (13%)

Query: 339 YVNKLQREV----PIIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQL--LKKMGFETLTFK 392
           YV++L  E+    P++ YH  ++++  K    T      +    Q+  LK+ G++T++  
Sbjct: 171 YVSELDCEIDTGIPVLTYHHLLKNEENKRFRHTSTTTSDVAFSNQMTYLKQAGYDTISLY 230

Query: 393 DLSEKGFIHRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVE 452
            L          PGK  +++T DDG +  Y    P+LK Y F+A  ++++          
Sbjct: 231 QLEAYLNNQINLPGKA-VVLTFDDGLKSVYRYAYPVLKNYGFRATAFIISSR-------- 281

Query: 453 VSDNPEKVVP----LMSPEQVKALHDSGLVEIGGHTMTHPFLSKLSESEQREEILRNKLE 508
           +  +P+K  P     MS  ++K + D  + ++  HT    FL +   + Q   + R+   
Sbjct: 282 IKRHPQKWNPDSLQFMSISELKQIQD--VFDVQSHTH---FLHRTDGNRQPILLSRSLHN 336

Query: 509 LE----------ALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPY 558
           +E          +     +   +YP+G ++  + Q A+D G+  AV T  G +    +PY
Sbjct: 337 IEFDFEHSRRALSQFNPHVLYVSYPFGGYNQRAIQAAKDAGFHMAVTTVQGKVKPGDNPY 396

Query: 559 QIRRIAIFPRTDT 571
            ++R+ I  RTD+
Sbjct: 397 TLKRLYIL-RTDS 408