Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Polysaccharide deacetylase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 31/261 (11%)

Query: 339 YVNKLQRE----VPIIMYHRFIRDDSEKGVH--GTYLHVQQLEKHFQLLKKMGFETLTFK 392
           YVN +  +    +PI+ YH  +RD+         T   V+        L+  G+ TLT  
Sbjct: 158 YVNAMDAQEDNGIPILTYHHILRDEENTRFRHTSTTTSVRAFSNQMTWLRDRGYATLTMY 217

Query: 393 DLSEKGFIHRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVE 452
            L E    +R     R + IT DDG +       P+LK+Y  KA  ++++          
Sbjct: 218 QL-EDYIYNRANFPARAVAITFDDGLKSVSRYAYPVLKQYDMKATAFIISSR-------- 268

Query: 453 VSDNPEKVVP----LMSPEQVKAL--------HDSGLVEIGGHTMTHPFLSKLSESEQRE 500
           +  +P+K  P     MS  +++ +        H   L  + GH    P L   S      
Sbjct: 269 IKRHPQKWNPRSLQFMSVSELRKISDVFDFQSHTHFLHRVDGHR--RPILYSRSYHNILF 326

Query: 501 EILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQI 560
           +  R++  L A     +   +YP+G ++AT+ + A+D G+  AV T  G +    +P  +
Sbjct: 327 DFERSRRAL-AQFTPHVFYLSYPFGGYNATAIKAAKDAGFHLAVTTVRGKVKPGDNPMLL 385

Query: 561 RRIAIFPRTDTFGLWRKVKGN 581
           +R+ I  RTD+     ++  N
Sbjct: 386 KRLYIL-RTDSLETMSRLISN 405