Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 273 a.a., Polysaccharide deacetylase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 58.5 bits (140), Expect = 3e-13
 Identities = 52/229 (22%), Positives = 105/229 (45%), Gaps = 42/229 (18%)

Query: 345 REVPIIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQ 404
           R +P++MYH      S+K    T L  +      + L + G++T+T  ++  + F H  +
Sbjct: 5   RHLPVLMYHHV----SDKPGQIT-LSPRTFRAQMKWLAESGWKTVTAAEV--EAFYHGAR 57

Query: 405 PGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKV---V 461
             ++ +++T D G+ DN+  + P+L+++   A +++VT          +SD P ++    
Sbjct: 58  LPRKSVMLTFDGGWLDNWLQVFPVLQEFNLHAHLFLVTS--------LISDGPVRIPAGE 109

Query: 462 PLMSPE-------------------QVKALHDSGLVEIGGHTMTH-----PFLSKLSESE 497
           P+ S +                   +V+ +H SGLVE   HT TH       +S+     
Sbjct: 110 PVYSHDECQMLVKQGRADEVMLRWSEVREMHLSGLVEFHSHTHTHRRWDQKPVSRNPSDL 169

Query: 498 QREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVAT 546
            R +IL ++  +  ++G       +P G + +    +A++LG+ +   T
Sbjct: 170 LRVDILLSRKRMREMLGYCSQHLCWPEGWYCSDYIHVAEELGFTYLYTT 218