Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., predicted polysaccharide deacetylase lipoprotein (NCBI) from Escherichia coli BW25113

 Score = 64.3 bits (155), Expect = 9e-15
 Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 27/247 (10%)

Query: 349 IIMYHRFIRDDSEKGVH--GTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI-HRLQP 405
           ++ YH  +RD+         T   V+        L+  G+ TL+   L  +G++ +++  
Sbjct: 172 VLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMVQL--EGYVKNKINL 229

Query: 406 GKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTG---ENFNRWDVEVSDNPEKVVP 462
             R ++IT DDG +       P+LK+Y  KA  ++VT     +  +W      NP K + 
Sbjct: 230 PARAVVITFDDGLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKW------NP-KSLQ 282

Query: 463 LMSPEQVKALHDSGLVEIGGHT--------MTHPFLSKLSESEQREEILRNKLELEALIG 514
            MS  ++  + D  + +   HT           P L   SE     +  R++  L A   
Sbjct: 283 FMSVSELNEIRD--VFDFQSHTHFLHRVDGYRRPILLSRSEHNILFDFARSRRAL-AQFN 339

Query: 515 EPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGL 574
             +   +YP+G  +  + + A D G+  AV T  G +    +P  ++R+ I  RTD+   
Sbjct: 340 PHVWYLSYPFGGFNDNAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYIL-RTDSLET 398

Query: 575 WRKVKGN 581
             ++  N
Sbjct: 399 MSRLVSN 405