Pairwise Alignments

Query, 590 a.a., polysaccharide deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB from Kangiella aquimarina DSM 16071

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 26/228 (11%)

Query: 372 QQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRFIIITVDDGYRDNYDLLLPLLKK 431
           + L +HF+ LK  G+  ++  ++ +     +  P K  +++T DDGY+  Y  + PLLK 
Sbjct: 66  RHLVEHFEWLKDNGYTVVSLDEIIKAKSGQQSLPEKA-VLLTFDDGYKSFYTQIFPLLKL 124

Query: 432 YQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEIGGHT------- 484
           Y + A   VVT    +   V      +     +S +Q++ +  SGL+EI  H+       
Sbjct: 125 YNYPATFAVVTSWIESEEPVNYGGVKKPADDFLSWQQIREMQQSGLIEIASHSHDMHRGL 184

Query: 485 ------------MTHPFLSKLSESE---QREEI--LRNKLEL-EALIGEPLTSFAYPYGD 526
                        T  F S+  E++   Q+  I  L+   +L E   G+   +  +PYG 
Sbjct: 185 QANPQGNTQPAATTREFSSESYETDTAFQKRIIKDLKTSYDLIEQNTGKAPRAIVWPYGS 244

Query: 527 HDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGL 574
           +   S  LAQ +GY  ++    G   ++    Q   I+  P     GL
Sbjct: 245 YSEYSWSLAQSIGYQQSLVLEQGKNAVNDSHIQRHLISGDPSDIELGL 292